BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 36945650)

  • 1. Spatial Transcriptomics Arena (STAr): an Integrated Platform for Spatial Transcriptomics Methodology Research.
    Jiang X; Luo D; Fern Ndez E; Yang J; Li H; Jin KW; Zhan Y; Yao B; Bedi S; Xiao G; Zhan X; Li Q; Xie Y
    bioRxiv; 2023 Mar; ():. PubMed ID: 36945650
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multi-modal domain adaptation for revealing spatial functional landscape from spatially resolved transcriptomics.
    Wang L; Hu Y; Xiao K; Zhang C; Shi Q; Chen L
    Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38819253
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computational elucidation of spatial gene expression variation from spatially resolved transcriptomics data.
    Li K; Yan C; Li C; Chen L; Zhao J; Zhang Z; Bao S; Sun J; Zhou M
    Mol Ther Nucleic Acids; 2022 Mar; 27():404-411. PubMed ID: 35036053
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Statistical and machine learning methods for spatially resolved transcriptomics with histology.
    Hu J; Schroeder A; Coleman K; Chen C; Auerbach BJ; Li M
    Comput Struct Biotechnol J; 2021; 19():3829-3841. PubMed ID: 34285782
    [TBL] [Abstract][Full Text] [Related]  

  • 5. iSC.MEB: an R package for multi-sample spatial clustering analysis of spatial transcriptomics data.
    Zhang X; Liu W; Song F; Liu J
    Bioinform Adv; 2023; 3(1):vbad019. PubMed ID: 36845201
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SRT-Server: powering the analysis of spatial transcriptomic data.
    Yang S; Zhou X
    Genome Med; 2024 Jan; 16(1):18. PubMed ID: 38279156
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Benchmarking spatial clustering methods with spatially resolved transcriptomics data.
    Yuan Z; Zhao F; Lin S; Zhao Y; Yao J; Cui Y; Zhang XY; Zhao Y
    Nat Methods; 2024 Apr; 21(4):712-722. PubMed ID: 38491270
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SORC: an integrated spatial omics resource in cancer.
    Zhou W; Su M; Jiang T; Yang Q; Sun Q; Xu K; Shi J; Yang C; Ding N; Li Y; Xu J
    Nucleic Acids Res; 2024 Jan; 52(D1):D1429-D1437. PubMed ID: 37811897
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational methods for alignment and integration of spatially resolved transcriptomics data.
    Liu Y; Yang C
    Comput Struct Biotechnol J; 2024 Dec; 23():1094-1105. PubMed ID: 38495555
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PASTE2: Partial Alignment of Multi-slice Spatially Resolved Transcriptomics Data.
    Liu X; Zeira R; Raphael BJ
    bioRxiv; 2023 Jan; ():. PubMed ID: 36711750
    [TBL] [Abstract][Full Text] [Related]  

  • 11. SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network.
    Hu J; Li X; Coleman K; Schroeder A; Ma N; Irwin DJ; Lee EB; Shinohara RT; Li M
    Nat Methods; 2021 Nov; 18(11):1342-1351. PubMed ID: 34711970
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Simulating multiple variability in spatially resolved transcriptomics with scCube.
    Qian J; Bao H; Shao X; Fang Y; Liao J; Chen Z; Li C; Guo W; Hu Y; Li A; Yao Y; Fan X; Cheng Y
    Nat Commun; 2024 Jun; 15(1):5021. PubMed ID: 38866768
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SRTsim: spatial pattern preserving simulations for spatially resolved transcriptomics.
    Zhu J; Shang L; Zhou X
    Genome Biol; 2023 Mar; 24(1):39. PubMed ID: 36869394
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Complete spatially resolved gene expression is not necessary for identifying spatial domains.
    Lin S; Cui Y; Zhao F; Yang Z; Song J; Yao J; Zhao Y; Qian BZ; Zhao Y; Yuan Z
    Cell Genom; 2024 Jun; 4(6):100565. PubMed ID: 38781966
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Reconstructing Spatial Transcriptomics at the Single-cell Resolution with BayesDeep.
    Jiang X; Dong L; Wang S; Wen Z; Chen M; Xu L; Xiao G; Li Q
    bioRxiv; 2023 Dec; ():. PubMed ID: 38106214
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SpotSweeper: spatially-aware quality control for spatial transcriptomics.
    Totty M; Hicks SC; Guo B
    bioRxiv; 2024 Jun; ():. PubMed ID: 38895212
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The Effectiveness of Integrated Care Pathways for Adults and Children in Health Care Settings: A Systematic Review.
    Allen D; Gillen E; Rixson L
    JBI Libr Syst Rev; 2009; 7(3):80-129. PubMed ID: 27820426
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SpaDecon: cell-type deconvolution in spatial transcriptomics with semi-supervised learning.
    Coleman K; Hu J; Schroeder A; Lee EB; Li M
    Commun Biol; 2023 Apr; 6(1):378. PubMed ID: 37029267
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Spatially resolved transcriptomics: advances and applications.
    Duan H; Cheng T; Cheng H
    Blood Sci; 2023 Jan; 5(1):1-14. PubMed ID: 36742187
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics.
    Ma Y; Zhou X
    Nat Methods; 2024 Jun; ():. PubMed ID: 38844627
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.