These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. A standard-enabled workflow for synthetic biology. Myers CJ; Beal J; Gorochowski TE; Kuwahara H; Madsen C; McLaughlin JA; Mısırlı G; Nguyen T; Oberortner E; Samineni M; Wipat A; Zhang M; Zundel Z Biochem Soc Trans; 2017 Jun; 45(3):793-803. PubMed ID: 28620041 [TBL] [Abstract][Full Text] [Related]
5. A Computational Workflow for the Automated Generation of Models of Genetic Designs. Misirli G; Nguyen T; McLaughlin JA; Vaidyanathan P; Jones TS; Densmore D; Myers C; Wipat A ACS Synth Biol; 2019 Jul; 8(7):1548-1559. PubMed ID: 29782151 [TBL] [Abstract][Full Text] [Related]
6. pySBOL: A Python Package for Genetic Design Automation and Standardization. Bartley BA; Choi K; Samineni M; Zundel Z; Nguyen T; Myers CJ; Sauro HM ACS Synth Biol; 2019 Jul; 8(7):1515-1518. PubMed ID: 30424601 [TBL] [Abstract][Full Text] [Related]
7. SBOLDesigner 2: An Intuitive Tool for Structural Genetic Design. Zhang M; McLaughlin JA; Wipat A; Myers CJ ACS Synth Biol; 2017 Jul; 6(7):1150-1160. PubMed ID: 28441476 [TBL] [Abstract][Full Text] [Related]
8. Toward a Sample Metadata Standard in Public Proteomics Repositories. Perez-Riverol Y; J Proteome Res; 2020 Oct; 19(10):3906-3909. PubMed ID: 32786688 [TBL] [Abstract][Full Text] [Related]
9. SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology. McLaughlin JA; Myers CJ; Zundel Z; Mısırlı G; Zhang M; Ofiteru ID; Goñi-Moreno A; Wipat A ACS Synth Biol; 2018 Feb; 7(2):682-688. PubMed ID: 29316788 [TBL] [Abstract][Full Text] [Related]
10. SBOLExplorer: Data Infrastructure and Data Mining for Genetic Design Repositories. Zhang M; Zundel Z; Myers CJ ACS Synth Biol; 2019 Oct; 8(10):2287-2294. PubMed ID: 31532640 [TBL] [Abstract][Full Text] [Related]
11. Toward the First Data Acquisition Standard in Synthetic Biology. Sainz de Murieta I; Bultelle M; Kitney RI ACS Synth Biol; 2016 Aug; 5(8):817-26. PubMed ID: 26854090 [TBL] [Abstract][Full Text] [Related]
12. The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology. Galdzicki M; Clancy KP; Oberortner E; Pocock M; Quinn JY; Rodriguez CA; Roehner N; Wilson ML; Adam L; Anderson JC; Bartley BA; Beal J; Chandran D; Chen J; Densmore D; Endy D; Grünberg R; Hallinan J; Hillson NJ; Johnson JD; Kuchinsky A; Lux M; Misirli G; Peccoud J; Plahar HA; Sirin E; Stan GB; Villalobos A; Wipat A; Gennari JH; Myers CJ; Sauro HM Nat Biotechnol; 2014 Jun; 32(6):545-50. PubMed ID: 24911500 [TBL] [Abstract][Full Text] [Related]
13. The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories. Bukhari SAC; O'Connor MJ; Martínez-Romero M; Egyedi AL; Willrett D; Graybeal J; Musen MA; Rubelt F; Cheung KH; Kleinstein SH Front Immunol; 2018; 9():1877. PubMed ID: 30166985 [TBL] [Abstract][Full Text] [Related]