BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 36996812)

  • 21. Architectural proteins for the formation and maintenance of the 3D genome.
    Li M; Gan J; Sun Y; Xu Z; Yang J; Sun Y; Li C
    Sci China Life Sci; 2020 Jun; 63(6):795-810. PubMed ID: 32249389
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
    Wutz G; Várnai C; Nagasaka K; Cisneros DA; Stocsits RR; Tang W; Schoenfelder S; Jessberger G; Muhar M; Hossain MJ; Walther N; Koch B; Kueblbeck M; Ellenberg J; Zuber J; Fraser P; Peters JM
    EMBO J; 2017 Dec; 36(24):3573-3599. PubMed ID: 29217591
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.
    Khoury A; Achinger-Kawecka J; Bert SA; Smith GC; French HJ; Luu PL; Peters TJ; Du Q; Parry AJ; Valdes-Mora F; Taberlay PC; Stirzaker C; Statham AL; Clark SJ
    Nat Commun; 2020 Jan; 11(1):54. PubMed ID: 31911579
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization.
    Kojic A; Cuadrado A; De Koninck M; Giménez-Llorente D; Rodríguez-Corsino M; Gómez-López G; Le Dily F; Marti-Renom MA; Losada A
    Nat Struct Mol Biol; 2018 Jun; 25(6):496-504. PubMed ID: 29867216
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Integrative characterization of G-Quadruplexes in the three-dimensional chromatin structure.
    Hou Y; Li F; Zhang R; Li S; Liu H; Qin ZS; Sun X
    Epigenetics; 2019 Sep; 14(9):894-911. PubMed ID: 31177910
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Loop stacking organizes genome folding from TADs to chromosomes.
    Hafner A; Park M; Berger SE; Murphy SE; Nora EP; Boettiger AN
    Mol Cell; 2023 May; 83(9):1377-1392.e6. PubMed ID: 37146570
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Chromatin Architecture in the Fly: Living without CTCF/Cohesin Loop Extrusion?: Alternating Chromatin States Provide a Basis for Domain Architecture in Drosophila.
    Matthews NE; White R
    Bioessays; 2019 Sep; 41(9):e1900048. PubMed ID: 31264253
    [TBL] [Abstract][Full Text] [Related]  

  • 28. ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry.
    Zhang M; Huang H; Li J; Wu Q
    Cell Rep; 2024 Jan; 43(1):113663. PubMed ID: 38206813
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments.
    Seitan VC; Faure AJ; Zhan Y; McCord RP; Lajoie BR; Ing-Simmons E; Lenhard B; Giorgetti L; Heard E; Fisher AG; Flicek P; Dekker J; Merkenschlager M
    Genome Res; 2013 Dec; 23(12):2066-77. PubMed ID: 24002784
    [TBL] [Abstract][Full Text] [Related]  

  • 30. 5C analysis of the Epidermal Differentiation Complex locus reveals distinct chromatin interaction networks between gene-rich and gene-poor TADs in skin epithelial cells.
    Poterlowicz K; Yarker JL; Malashchuk I; Lajoie BR; Mardaryev AN; Gdula MR; Sharov AA; Kohwi-Shigematsu T; Botchkarev VA; Fessing MY
    PLoS Genet; 2017 Sep; 13(9):e1006966. PubMed ID: 28863138
    [TBL] [Abstract][Full Text] [Related]  

  • 31. CTCF: a Swiss-army knife for genome organization and transcription regulation.
    Braccioli L; de Wit E
    Essays Biochem; 2019 Apr; 63(1):157-165. PubMed ID: 30940740
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Chromatin jets define the properties of cohesin-driven in vivo loop extrusion.
    Guo Y; Al-Jibury E; Garcia-Millan R; Ntagiantas K; King JWD; Nash AJ; Galjart N; Lenhard B; Rueckert D; Fisher AG; Pruessner G; Merkenschlager M
    Mol Cell; 2022 Oct; 82(20):3769-3780.e5. PubMed ID: 36182691
    [TBL] [Abstract][Full Text] [Related]  

  • 33. CTCF shapes chromatin structure and gene expression in health and disease.
    Dehingia B; Milewska M; Janowski M; Pękowska A
    EMBO Rep; 2022 Sep; 23(9):e55146. PubMed ID: 35993175
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The Mediator complex regulates enhancer-promoter interactions.
    Ramasamy S; Aljahani A; Karpinska MA; Cao TBN; Velychko T; Cruz JN; Lidschreiber M; Oudelaar AM
    Nat Struct Mol Biol; 2023 Jul; 30(7):991-1000. PubMed ID: 37430065
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The human β-globin enhancer LCR HS2 plays a role in forming a TAD by activating chromatin structure at neighboring CTCF sites.
    Kim J; Kang J; Kim YW; Kim A
    FASEB J; 2021 Jun; 35(6):e21669. PubMed ID: 34033138
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Enhancer-promoter contact formation requires RNAPII and antagonizes loop extrusion.
    Zhang S; Übelmesser N; Barbieri M; Papantonis A
    Nat Genet; 2023 May; 55(5):832-840. PubMed ID: 37012454
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus.
    Wu Y; Jia Z; Ge X; Wu Q
    Sci China Life Sci; 2020 Jun; 63(6):835-844. PubMed ID: 32249388
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Cohesin and CTCF complexes mediate contacts in chromatin loops depending on nucleosome positions.
    Attou A; Zülske T; Wedemann G
    Biophys J; 2022 Dec; 121(24):4788-4799. PubMed ID: 36325618
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Loop competition and extrusion model predicts CTCF interaction specificity.
    Xi W; Beer MA
    Nat Commun; 2021 Feb; 12(1):1046. PubMed ID: 33594051
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders.
    Uusküla-Reimand L; Hou H; Samavarchi-Tehrani P; Rudan MV; Liang M; Medina-Rivera A; Mohammed H; Schmidt D; Schwalie P; Young EJ; Reimand J; Hadjur S; Gingras AC; Wilson MD
    Genome Biol; 2016 Aug; 17(1):182. PubMed ID: 27582050
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.