126 related articles for article (PubMed ID: 37066251)
1. Genomics to Notebook (g2nb): extending the electronic notebook to address the challenges of bioinformatics analysis.
Reich M; Tabor T; Liefeld J; Joshi J; Kim F; Thorvaldsdottir H; Blankenberg D; Mesirov JP
bioRxiv; 2023 Apr; ():. PubMed ID: 37066251
[TBL] [Abstract][Full Text] [Related]
2. The GenePattern Notebook Environment.
Reich M; Tabor T; Liefeld T; Thorvaldsdóttir H; Hill B; Tamayo P; Mesirov JP
Cell Syst; 2017 Aug; 5(2):149-151.e1. PubMed ID: 28822753
[TBL] [Abstract][Full Text] [Related]
3. An accessible infrastructure for artificial intelligence using a Docker-based JupyterLab in Galaxy.
Kumar A; Cuccuru G; Grüning B; Backofen R
Gigascience; 2022 Dec; 12():. PubMed ID: 37099385
[TBL] [Abstract][Full Text] [Related]
4. Reproducible Bioconductor workflows using browser-based interactive notebooks and containers.
Almugbel R; Hung LH; Hu J; Almutairy A; Ortogero N; Tamta Y; Yeung KY
J Am Med Inform Assoc; 2018 Jan; 25(1):4-12. PubMed ID: 29092073
[TBL] [Abstract][Full Text] [Related]
5. An accessible GenePattern notebook for the copy number variation analysis of Illumina Infinium DNA methylation arrays.
Mah CK; Mesirov JP; Chavez L
F1000Res; 2018; 7():. PubMed ID: 31105932
[TBL] [Abstract][Full Text] [Related]
6. Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks.
Rosenberg DM; Horn CC
J Neurophysiol; 2016 Aug; 116(2):252-62. PubMed ID: 27098025
[TBL] [Abstract][Full Text] [Related]
7. Scientific Notebook Software: Applications for Academic Radiology.
Richardson ML; Amini B
Curr Probl Diagn Radiol; 2018 Nov; 47(6):368-377. PubMed ID: 29122394
[TBL] [Abstract][Full Text] [Related]
8. SoS Notebook: an interactive multi-language data analysis environment.
Peng B; Wang G; Ma J; Leong MC; Wakefield C; Melott J; Chiu Y; Du D; Weinstein JN
Bioinformatics; 2018 Nov; 34(21):3768-3770. PubMed ID: 29790910
[TBL] [Abstract][Full Text] [Related]
9. Teaching Python programming for bioinformatics with Jupyter notebook in the Post-COVID-19 era.
Gupta YM; Kirana SN; Homchan S; Tanasarnpaiboon S
Biochem Mol Biol Educ; 2023; 51(5):537-539. PubMed ID: 37199252
[TBL] [Abstract][Full Text] [Related]
10. Teaching Radiology Physics Interactively with Scientific Notebook Software.
Richardson ML; Amini B
Acad Radiol; 2018 Jun; 25(6):801-810. PubMed ID: 29751860
[TBL] [Abstract][Full Text] [Related]
11. An accessible, interactive GenePattern Notebook for analysis and exploration of single-cell transcriptomic data.
Mah CK; Wenzel AT; Juarez EF; Tabor T; Reich MM; Mesirov JP
F1000Res; 2018; 7():1306. PubMed ID: 31316748
[TBL] [Abstract][Full Text] [Related]
12. igv.js: an embeddable JavaScript implementation of the Integrative Genomics Viewer (IGV).
Robinson JT; Thorvaldsdottir H; Turner D; Mesirov JP
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36562559
[TBL] [Abstract][Full Text] [Related]
13. The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks.
Naldi A; Hernandez C; Levy N; Stoll G; Monteiro PT; Chaouiya C; Helikar T; Zinovyev A; Calzone L; Cohen-Boulakia S; Thieffry D; Paulevé L
Front Physiol; 2018; 9():680. PubMed ID: 29971009
[TBL] [Abstract][Full Text] [Related]
14. BioJupies: Automated Generation of Interactive Notebooks for RNA-Seq Data Analysis in the Cloud.
Torre D; Lachmann A; Ma'ayan A
Cell Syst; 2018 Nov; 7(5):556-561.e3. PubMed ID: 30447998
[TBL] [Abstract][Full Text] [Related]
15. Enhancing knowledge discovery from cancer genomics data with Galaxy.
Albuquerque MA; Grande BM; Ritch EJ; Pararajalingam P; Jessa S; Krzywinski M; Grewal JK; Shah SP; Boutros PC; Morin RD
Gigascience; 2017 May; 6(5):1-13. PubMed ID: 28327945
[TBL] [Abstract][Full Text] [Related]
16. A review of electronic laboratory notebooks available in the market today.
Rubacha M; Rattan AK; Hosselet SC
J Lab Autom; 2011 Feb; 16(1):90-8. PubMed ID: 21609689
[TBL] [Abstract][Full Text] [Related]
17. Appyters: Turning Jupyter Notebooks into data-driven web apps.
Clarke DJB; Jeon M; Stein DJ; Moiseyev N; Kropiwnicki E; Dai C; Xie Z; Wojciechowicz ML; Litz S; Hom J; Evangelista JE; Goldman L; Zhang S; Yoon C; Ahamed T; Bhuiyan S; Cheng M; Karam J; Jagodnik KM; Shu I; Lachmann A; Ayling S; Jenkins SL; Ma'ayan A
Patterns (N Y); 2021 Mar; 2(3):100213. PubMed ID: 33748796
[TBL] [Abstract][Full Text] [Related]
18. An Approach to Improve Laboratory Notebook Feedback and Decrease Instructor Fatigue from Grading Undergraduate Laboratory Notebooks.
Fleming EJ
J Microbiol Biol Educ; 2023 Apr; 24(1):. PubMed ID: 37089219
[TBL] [Abstract][Full Text] [Related]
19. A universal open-source Electronic Laboratory Notebook.
Voegele C; Bouchereau B; Robinot N; McKay J; Damiecki P; Alteyrac L
Bioinformatics; 2013 Jul; 29(13):1710-2. PubMed ID: 23645817
[TBL] [Abstract][Full Text] [Related]
20. Enhancing Learning About Epidemiological Data Analysis Using R for Graduate Students in Medical Fields With Jupyter Notebook: Classroom Action Research.
Kumwichar P
JMIR Med Educ; 2023 May; 9():e47394. PubMed ID: 37247206
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
