248 related articles for article (PubMed ID: 37070199)
1. AlloReverse: multiscale understanding among hierarchical allosteric regulations.
Zha J; Li Q; Liu X; Lin W; Wang T; Wei J; Zhang Z; Lu X; Wu J; Ni D; Song K; Zhang L; Lu X; Lu S; Zhang J
Nucleic Acids Res; 2023 Jul; 51(W1):W33-W38. PubMed ID: 37070199
[TBL] [Abstract][Full Text] [Related]
2. AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses.
Huang M; Song K; Liu X; Lu S; Shen Q; Wang R; Gao J; Hong Y; Li Q; Ni D; Xu J; Chen G; Zhang J
Nucleic Acids Res; 2018 Jul; 46(W1):W451-W458. PubMed ID: 29757429
[TBL] [Abstract][Full Text] [Related]
3. DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations.
Song Q; Li M; Li Q; Lu X; Song K; Zhang Z; Wei J; Zhang L; Wei J; Ye Y; Zha J; Zhang Q; Gao Q; Long J; Liu X; Lu X; Zhang J
Nucleic Acids Res; 2023 Jul; 51(W1):W129-W133. PubMed ID: 37078611
[TBL] [Abstract][Full Text] [Related]
4. Progress in Allosteric Database.
Song K; Zhang J; Lu S
Adv Exp Med Biol; 2019; 1163():65-87. PubMed ID: 31707700
[TBL] [Abstract][Full Text] [Related]
5. ASD v2.0: updated content and novel features focusing on allosteric regulation.
Huang Z; Mou L; Shen Q; Lu S; Li C; Liu X; Wang G; Li S; Geng L; Liu Y; Wu J; Chen G; Zhang J
Nucleic Acids Res; 2014 Jan; 42(Database issue):D510-6. PubMed ID: 24293647
[TBL] [Abstract][Full Text] [Related]
6. Harnessing allostery: a novel approach to drug discovery.
Lu S; Li S; Zhang J
Med Res Rev; 2014 Nov; 34(6):1242-85. PubMed ID: 24827416
[TBL] [Abstract][Full Text] [Related]
7. Allosteric Methods and Their Applications: Facilitating the Discovery of Allosteric Drugs and the Investigation of Allosteric Mechanisms.
Lu S; Shen Q; Zhang J
Acc Chem Res; 2019 Feb; 52(2):492-500. PubMed ID: 30688063
[TBL] [Abstract][Full Text] [Related]
8. SPACER: Server for predicting allosteric communication and effects of regulation.
Goncearenco A; Mitternacht S; Yong T; Eisenhaber B; Eisenhaber F; Berezovsky IN
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W266-72. PubMed ID: 23737445
[TBL] [Abstract][Full Text] [Related]
9. Allosite: a method for predicting allosteric sites.
Huang W; Lu S; Huang Z; Liu X; Mou L; Luo Y; Zhao Y; Liu Y; Chen Z; Hou T; Zhang J
Bioinformatics; 2013 Sep; 29(18):2357-9. PubMed ID: 23842804
[TBL] [Abstract][Full Text] [Related]
10. ASD: a comprehensive database of allosteric proteins and modulators.
Huang Z; Zhu L; Cao Y; Wu G; Liu X; Chen Y; Wang Q; Shi T; Zhao Y; Wang Y; Li W; Li Y; Chen H; Chen G; Zhang J
Nucleic Acids Res; 2011 Jan; 39(Database issue):D663-9. PubMed ID: 21051350
[TBL] [Abstract][Full Text] [Related]
11. ASD2023: towards the integrating landscapes of allosteric knowledgebase.
He J; Liu X; Zhu C; Zha J; Li Q; Zhao M; Wei J; Li M; Wu C; Wang J; Jiao Y; Ning S; Zhou J; Hong Y; Liu Y; He H; Zhang M; Chen F; Li Y; He X; Wu J; Lu S; Song K; Lu X; Zhang J
Nucleic Acids Res; 2024 Jan; 52(D1):D376-D383. PubMed ID: 37870448
[TBL] [Abstract][Full Text] [Related]
12. Uncovering the Dominant Motion Modes of Allosteric Regulation Improves Allosteric Site Prediction.
Xie J; Wang S; Xu Y; Deng M; Lai L
J Chem Inf Model; 2022 Jan; 62(1):187-195. PubMed ID: 34964625
[TBL] [Abstract][Full Text] [Related]
13. Alloscore: a method for predicting allosteric ligand-protein interactions.
Li S; Shen Q; Su M; Liu X; Lu S; Chen Z; Wang R; Zhang J
Bioinformatics; 2016 May; 32(10):1574-6. PubMed ID: 26803160
[TBL] [Abstract][Full Text] [Related]
14. PASSerRank: Prediction of allosteric sites with learning to rank.
Tian H; Xiao S; Jiang X; Tao P
J Comput Chem; 2023 Oct; 44(28):2223-2229. PubMed ID: 37561047
[TBL] [Abstract][Full Text] [Related]
15. ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks.
Shen Q; Wang G; Li S; Liu X; Lu S; Chen Z; Song K; Yan J; Geng L; Huang Z; Huang W; Chen G; Zhang J
Nucleic Acids Res; 2016 Jan; 44(D1):D527-35. PubMed ID: 26365237
[TBL] [Abstract][Full Text] [Related]
16. Discovery of cryptic allosteric sites using reversed allosteric communication by a combined computational and experimental strategy.
Ni D; Wei J; He X; Rehman AU; Li X; Qiu Y; Pu J; Lu S; Zhang J
Chem Sci; 2020 Nov; 12(1):464-476. PubMed ID: 34163609
[TBL] [Abstract][Full Text] [Related]
17. AlloPred: prediction of allosteric pockets on proteins using normal mode perturbation analysis.
Greener JG; Sternberg MJ
BMC Bioinformatics; 2015 Oct; 16():335. PubMed ID: 26493317
[TBL] [Abstract][Full Text] [Related]
18. Unraveling allosteric landscapes of allosterome with ASD.
Liu X; Lu S; Song K; Shen Q; Ni D; Li Q; He X; Zhang H; Wang Q; Chen Y; Li X; Wu J; Sheng C; Chen G; Liu Y; Lu X; Zhang J
Nucleic Acids Res; 2020 Jan; 48(D1):D394-D401. PubMed ID: 31665428
[TBL] [Abstract][Full Text] [Related]
19. AlloSigMA 2: paving the way to designing allosteric effectors and to exploring allosteric effects of mutations.
Tan ZW; Guarnera E; Tee WV; Berezovsky IN
Nucleic Acids Res; 2020 Jul; 48(W1):W116-W124. PubMed ID: 32392302
[TBL] [Abstract][Full Text] [Related]
20. Computational Tools for Allosteric Drug Discovery: Site Identification and Focus Library Design.
Huang W; Nussinov R; Zhang J
Methods Mol Biol; 2017; 1529():439-446. PubMed ID: 27914066
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
