289 related articles for article (PubMed ID: 37131128)
1. Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes.
Karin BR; Arellano S; Wang L; Walzer K; Pomerantz A; Vasquez JM; Chatla K; Sudmant PH; Bach BH; Smith LL; McGuire JA
BMC Genomics; 2023 May; 24(1):229. PubMed ID: 37131128
[TBL] [Abstract][Full Text] [Related]
2. Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis.
Baeza JA; García-De León FJ
BMC Genomics; 2022 Apr; 23(1):320. PubMed ID: 35459089
[TBL] [Abstract][Full Text] [Related]
3. Approaches to Whole Mitochondrial Genome Sequencing on the Oxford Nanopore MinION.
Zascavage RR; Hall CL; Thorson K; Mahmoud M; Sedlazeck FJ; Planz JV
Curr Protoc Hum Genet; 2019 Dec; 104(1):e94. PubMed ID: 31743587
[TBL] [Abstract][Full Text] [Related]
4. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
[TBL] [Abstract][Full Text] [Related]
5. The use of Oxford Nanopore native barcoding for complete genome assembly.
Bayliss SC; Hunt VL; Yokoyama M; Thorpe HA; Feil EJ
Gigascience; 2017 Mar; 6(3):1-6. PubMed ID: 28327913
[TBL] [Abstract][Full Text] [Related]
6. Utilisation of Oxford Nanopore sequencing to generate six complete gastropod mitochondrial genomes as part of a biodiversity curriculum.
De Vivo M; Lee HH; Huang YS; Dreyer N; Fong CL; de Mattos FMG; Jain D; Wen YV; Mwihaki JK; Wang TY; Machida RJ; Wang J; Chan BKK; Tsai IJ
Sci Rep; 2022 Jun; 12(1):9973. PubMed ID: 35705661
[TBL] [Abstract][Full Text] [Related]
7. Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens.
Loit K; Adamson K; Bahram M; Puusepp R; Anslan S; Kiiker R; Drenkhan R; Tedersoo L
Appl Environ Microbiol; 2019 Nov; 85(21):. PubMed ID: 31444199
[TBL] [Abstract][Full Text] [Related]
8. A high-throughput multiplexing and selection strategy to complete bacterial genomes.
Arredondo-Alonso S; Pöntinen AK; Cléon F; Gladstone RA; Schürch AC; Johnsen PJ; Samuelsen Ø; Corander J
Gigascience; 2021 Dec; 10(12):. PubMed ID: 34891160
[TBL] [Abstract][Full Text] [Related]
9. Forensic nanopore sequencing of microhaplotype markers using QitanTech's QNome.
Wang Z; Qin L; Liu J; Jiang L; Zou X; Chen X; Song F; Dai H; Hou Y
Forensic Sci Int Genet; 2022 Mar; 57():102657. PubMed ID: 34973558
[TBL] [Abstract][Full Text] [Related]
10. High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing.
Karst SM; Ziels RM; Kirkegaard RH; Sørensen EA; McDonald D; Zhu Q; Knight R; Albertsen M
Nat Methods; 2021 Feb; 18(2):165-169. PubMed ID: 33432244
[TBL] [Abstract][Full Text] [Related]
11. Assessment of a multiplex PCR and Nanopore-based method for dengue virus sequencing in Indonesia.
Stubbs SCB; Blacklaws BA; Yohan B; Yudhaputri FA; Hayati RF; Schwem B; Salvaña EM; Destura RV; Lester JS; Myint KS; Sasmono RT; Frost SDW
Virol J; 2020 Feb; 17(1):24. PubMed ID: 32054488
[TBL] [Abstract][Full Text] [Related]
12. Proof of concept for multiplex amplicon sequencing for mutation identification using the MinION nanopore sequencer.
Whitford W; Hawkins V; Moodley KS; Grant MJ; Lehnert K; Snell RG; Jacobsen JC
Sci Rep; 2022 May; 12(1):8572. PubMed ID: 35595858
[TBL] [Abstract][Full Text] [Related]
13. Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad taxonomic scale.
Krehenwinkel H; Pomerantz A; Henderson JB; Kennedy SR; Lim JY; Swamy V; Shoobridge JD; Graham N; Patel NH; Gillespie RG; Prost S
Gigascience; 2019 May; 8(5):. PubMed ID: 30824940
[TBL] [Abstract][Full Text] [Related]
14. Amplicon-Based, Next-Generation Sequencing Approaches to Characterize Single Nucleotide Polymorphisms of
Taylor MK; Williams EP; Wongsurawat T; Jenjaroenpun P; Nookaew I; Jonsson CB
Front Cell Infect Microbiol; 2020; 10():565591. PubMed ID: 33163416
[TBL] [Abstract][Full Text] [Related]
15. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.
Goldstein S; Beka L; Graf J; Klassen JL
BMC Genomics; 2019 Jan; 20(1):23. PubMed ID: 30626323
[TBL] [Abstract][Full Text] [Related]
16. 1D Genome Sequencing on the Oxford Nanopore MinION.
Goodwin S; Wappel R; McCombie WR
Curr Protoc Hum Genet; 2017 Jul; 94():18.11.1-18.11.14. PubMed ID: 28696556
[TBL] [Abstract][Full Text] [Related]
17. Optimization of Oxford Nanopore Technology Sequencing Workflow for Detection of Amplicons in Real Time Using ONT-DART Tool.
Player R; Verratti K; Staab A; Forsyth E; Ernlund A; Joshi MS; Dunning R; Rozak D; Grady S; Goodwin B; Sozhamannan S
Genes (Basel); 2022 Oct; 13(10):. PubMed ID: 36292670
[TBL] [Abstract][Full Text] [Related]
18. Comparison of De Novo Assembly Strategies for Bacterial Genomes.
Zhang P; Jiang D; Wang Y; Yao X; Luo Y; Yang Z
Int J Mol Sci; 2021 Jul; 22(14):. PubMed ID: 34299288
[TBL] [Abstract][Full Text] [Related]
19. Highly accurate long reads are crucial for realizing the potential of biodiversity genomics.
Hotaling S; Wilcox ER; Heckenhauer J; Stewart RJ; Frandsen PB
BMC Genomics; 2023 Mar; 24(1):117. PubMed ID: 36927511
[TBL] [Abstract][Full Text] [Related]
20. A new method for long-read sequencing of animal mitochondrial genomes: application to the identification of equine mitochondrial DNA variants.
Dhorne-Pollet S; Barrey E; Pollet N
BMC Genomics; 2020 Nov; 21(1):785. PubMed ID: 33176683
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
