173 related articles for article (PubMed ID: 37151482)
1. Real or fake? Measuring the impact of protein annotation errors on estimates of domain gain and loss events.
Kress A; Poch O; Lecompte O; Thompson JD
Front Bioinform; 2023; 3():1178926. PubMed ID: 37151482
[TBL] [Abstract][Full Text] [Related]
2. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
Zhang DL; Ji L; Li YD
Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
[TBL] [Abstract][Full Text] [Related]
3. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
[TBL] [Abstract][Full Text] [Related]
4. Understanding the causes of errors in eukaryotic protein-coding gene prediction: a case study of primate proteomes.
Meyer C; Scalzitti N; Jeannin-Girardon A; Collet P; Poch O; Thompson JD
BMC Bioinformatics; 2020 Nov; 21(1):513. PubMed ID: 33172385
[TBL] [Abstract][Full Text] [Related]
5. Measuring the impact of gene prediction on gene loss estimates in Eukaryotes by quantifying falsely inferred absences.
Deutekom ES; Vosseberg J; van Dam TJP; Snel B
PLoS Comput Biol; 2019 Aug; 15(8):e1007301. PubMed ID: 31461468
[TBL] [Abstract][Full Text] [Related]
6. Identification of new protein coding sequences and signal peptidase cleavage sites of Helicobacter pylori strain 26695 by proteogenomics.
Müller SA; Findeiß S; Pernitzsch SR; Wissenbach DK; Stadler PF; Hofacker IL; von Bergen M; Kalkhof S
J Proteomics; 2013 Jun; 86():27-42. PubMed ID: 23665149
[TBL] [Abstract][Full Text] [Related]
7. CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts.
Testa AC; Hane JK; Ellwood SR; Oliver RP
BMC Genomics; 2015 Mar; 16(1):170. PubMed ID: 25887563
[TBL] [Abstract][Full Text] [Related]
8. Reassessing domain architecture evolution of metazoan proteins: major impact of gene prediction errors.
Nagy A; Szláma G; Szarka E; Trexler M; Bányai L; Patthy L
Genes (Basel); 2011 Jul; 2(3):449-501. PubMed ID: 24710207
[TBL] [Abstract][Full Text] [Related]
9. A domain-centric solution to functional genomics via dcGO Predictor.
Fang H; Gough J
BMC Bioinformatics; 2013; 14 Suppl 3(Suppl 3):S9. PubMed ID: 23514627
[TBL] [Abstract][Full Text] [Related]
10. Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis.
Lees JG; Lee D; Studer RA; Dawson NL; Sillitoe I; Das S; Yeats C; Dessailly BH; Rentzsch R; Orengo CA
Nucleic Acids Res; 2014 Jan; 42(Database issue):D240-5. PubMed ID: 24270792
[TBL] [Abstract][Full Text] [Related]
11. Automatic annotation of protein function based on family identification.
Abascal F; Valencia A
Proteins; 2003 Nov; 53(3):683-92. PubMed ID: 14579359
[TBL] [Abstract][Full Text] [Related]
12. Assessing the impact of human genome annotation choice on RNA-seq expression estimates.
Wu PY; Phan JH; Wang MD
BMC Bioinformatics; 2013; 14 Suppl 11(Suppl 11):S8. PubMed ID: 24564364
[TBL] [Abstract][Full Text] [Related]
13. Exploring inconsistencies in genome-wide protein function annotations: a machine learning approach.
Andorf C; Dobbs D; Honavar V
BMC Bioinformatics; 2007 Aug; 8():284. PubMed ID: 17683567
[TBL] [Abstract][Full Text] [Related]
14. Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes.
Bocs S; Danchin A; Médigue C
BMC Bioinformatics; 2002; 3():5. PubMed ID: 11879526
[TBL] [Abstract][Full Text] [Related]
15. Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.
Mirkin BG; Fenner TI; Galperin MY; Koonin EV
BMC Evol Biol; 2003 Jan; 3():2. PubMed ID: 12515582
[TBL] [Abstract][Full Text] [Related]
16. DODO: an efficient orthologous genes assignment tool based on domain architectures. Domain based ortholog detection.
Chen TW; Wu TH; Ng WV; Lin WC
BMC Bioinformatics; 2010 Oct; 11 Suppl 7(Suppl 7):S6. PubMed ID: 21106128
[TBL] [Abstract][Full Text] [Related]
17. A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV; Cornish AS; Maudhoo MD; Gibbs RM; Zhang X; Pandey S; Meehan DT; Wipfler K; Bosinger SE; Johnson ZP; Tharp GK; Marçais G; Roberts M; Ferguson B; Fox HS; Treangen T; Salzberg SL; Yorke JA; Norgren RB
Biol Direct; 2014 Oct; 9(1):20. PubMed ID: 25319552
[TBL] [Abstract][Full Text] [Related]
18. Repertoire-wide gene structure analyses: a case study comparing automatically predicted and manually annotated gene models.
Wilbrandt J; Misof B; Panfilio KA; Niehuis O
BMC Genomics; 2019 Oct; 20(1):753. PubMed ID: 31623555
[TBL] [Abstract][Full Text] [Related]
19. CGKB: an annotation knowledge base for cowpea (Vigna unguiculata L.) methylation filtered genomic genespace sequences.
Chen X; Laudeman TW; Rushton PJ; Spraggins TA; Timko MP
BMC Bioinformatics; 2007 Apr; 8():129. PubMed ID: 17445272
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
