190 related articles for article (PubMed ID: 37158941)
1. Hybrid allele-specific ChIP-seq analysis identifies variation in brassinosteroid-responsive transcription factor binding linked to traits in maize.
Hartwig T; Banf M; Prietsch GP; Zhu JY; Mora-Ramírez I; Schippers JHM; Snodgrass SJ; Seetharam AS; Huettel B; Kolkman JM; Yang J; Engelhorn J; Wang ZY
Genome Biol; 2023 May; 24(1):108. PubMed ID: 37158941
[TBL] [Abstract][Full Text] [Related]
2. Overexpression of a maize BR transcription factor ZmBZR1 in Arabidopsis enlarges organ and seed size of the transgenic plants.
Zhang X; Guo W; Du D; Pu L; Zhang C
Plant Sci; 2020 Mar; 292():110378. PubMed ID: 32005383
[TBL] [Abstract][Full Text] [Related]
3. The native cistrome and sequence motif families of the maize ear.
Savadel SD; Hartwig T; Turpin ZM; Vera DL; Lung PY; Sui X; Blank M; Frommer WB; Dennis JH; Zhang J; Bass HW
PLoS Genet; 2021 Aug; 17(8):e1009689. PubMed ID: 34383745
[TBL] [Abstract][Full Text] [Related]
4. Identification of breast cancer associated variants that modulate transcription factor binding.
Liu Y; Walavalkar NM; Dozmorov MG; Rich SS; Civelek M; Guertin MJ
PLoS Genet; 2017 Sep; 13(9):e1006761. PubMed ID: 28957321
[TBL] [Abstract][Full Text] [Related]
5. Substantial contribution of genetic variation in the expression of transcription factors to phenotypic variation revealed by eRD-GWAS.
Lin HY; Liu Q; Li X; Yang J; Liu S; Huang Y; Scanlon MJ; Nettleton D; Schnable PS
Genome Biol; 2017 Oct; 18(1):192. PubMed ID: 29041960
[TBL] [Abstract][Full Text] [Related]
6. Maize transcription factor ZmBES1/BZR1-5 positively regulates kernel size.
Sun F; Ding L; Feng W; Cao Y; Lu F; Yang Q; Li W; Lu Y; Shabek N; Fu F; Yu H
J Exp Bot; 2021 Feb; 72(5):1714-1726. PubMed ID: 33206180
[TBL] [Abstract][Full Text] [Related]
7. Characterization of regulatory modules controlling leaf angle in maize.
Wang X; Wang X; Sun S; Tu X; Lin K; Qin L; Wang X; Li G; Zhong S; Li P
Plant Physiol; 2022 Aug; 190(1):500-515. PubMed ID: 35758633
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide identification of transcription factor-binding sites in plants using chromatin immunoprecipitation followed by microarray (ChIP-chip) or sequencing (ChIP-seq).
Zhu JY; Sun Y; Wang ZY
Methods Mol Biol; 2012; 876():173-88. PubMed ID: 22576095
[TBL] [Abstract][Full Text] [Related]
9. Evaluating the impact of single nucleotide variants on transcription factor binding.
Shi W; Fornes O; Mathelier A; Wasserman WW
Nucleic Acids Res; 2016 Dec; 44(21):10106-10116. PubMed ID: 27492288
[TBL] [Abstract][Full Text] [Related]
10. Reconstructing the maize leaf regulatory network using ChIP-seq data of 104 transcription factors.
Tu X; Mejía-Guerra MK; Valdes Franco JA; Tzeng D; Chu PY; Shen W; Wei Y; Dai X; Li P; Buckler ES; Zhong S
Nat Commun; 2020 Oct; 11(1):5089. PubMed ID: 33037196
[TBL] [Abstract][Full Text] [Related]
11. regSNPs-ASB: A Computational Framework for Identifying Allele-Specific Transcription Factor Binding From ATAC-seq Data.
Xu S; Feng W; Lu Z; Yu CY; Shao W; Nakshatri H; Reiter JL; Gao H; Chu X; Wang Y; Liu Y
Front Bioeng Biotechnol; 2020; 8():886. PubMed ID: 32850739
[TBL] [Abstract][Full Text] [Related]
12. Genome-wide characterization of cis-acting DNA targets reveals the transcriptional regulatory framework of opaque2 in maize.
Li C; Qiao Z; Qi W; Wang Q; Yuan Y; Yang X; Tang Y; Mei B; Lv Y; Zhao H; Xiao H; Song R
Plant Cell; 2015 Mar; 27(3):532-45. PubMed ID: 25691733
[TBL] [Abstract][Full Text] [Related]
13. Brassinosteroid and gibberellin control of seedling traits in maize (Zea mays L.).
Hu S; Sanchez DL; Wang C; Lipka AE; Yin Y; Gardner CAC; Lübberstedt T
Plant Sci; 2017 Oct; 263():132-141. PubMed ID: 28818369
[TBL] [Abstract][Full Text] [Related]
14. Identification of Brassinosteroid Target Genes by Chromatin Immunoprecipitation Followed by High-Throughput Sequencing (ChIP-seq) and RNA-Sequencing.
Nolan T; Liu S; Guo H; Li L; Schnable P; Yin Y
Methods Mol Biol; 2017; 1564():63-79. PubMed ID: 28124247
[TBL] [Abstract][Full Text] [Related]
15. Genome-wide analysis of ZmDREB genes and their association with natural variation in drought tolerance at seedling stage of Zea mays L.
Liu S; Wang X; Wang H; Xin H; Yang X; Yan J; Li J; Tran LS; Shinozaki K; Yamaguchi-Shinozaki K; Qin F
PLoS Genet; 2013; 9(9):e1003790. PubMed ID: 24086146
[TBL] [Abstract][Full Text] [Related]
16. Integration of VDR genome wide binding and GWAS genetic variation data reveals co-occurrence of VDR and NF-κB binding that is linked to immune phenotypes.
Singh PK; van den Berg PR; Long MD; Vreugdenhil A; Grieshober L; Ochs-Balcom HM; Wang J; Delcambre S; Heikkinen S; Carlberg C; Campbell MJ; Sucheston-Campbell LE
BMC Genomics; 2017 Feb; 18(1):132. PubMed ID: 28166722
[TBL] [Abstract][Full Text] [Related]
17. Transcription factor HAT1 is phosphorylated by BIN2 kinase and mediates brassinosteroid repressed gene expression in Arabidopsis.
Zhang D; Ye H; Guo H; Johnson A; Zhang M; Lin H; Yin Y
Plant J; 2014 Jan; 77(1):59-70. PubMed ID: 24164091
[TBL] [Abstract][Full Text] [Related]
18. CLA4 regulates leaf angle through multiple hormone signaling pathways in maize.
Dou D; Han S; Cao L; Ku L; Liu H; Su H; Ren Z; Zhang D; Zeng H; Dong Y; Liu Z; Zhu F; Zhao Q; Xie J; Liu Y; Cheng H; Chen Y
J Exp Bot; 2021 Feb; 72(5):1782-1794. PubMed ID: 33270106
[TBL] [Abstract][Full Text] [Related]
19. Genetic regulatory signatures underlying islet gene expression and type 2 diabetes.
Varshney A; Scott LJ; Welch RP; Erdos MR; Chines PS; Narisu N; Albanus RD; Orchard P; Wolford BN; Kursawe R; Vadlamudi S; Cannon ME; Didion JP; Hensley J; Kirilusha A; ; Bonnycastle LL; Taylor DL; Watanabe R; Mohlke KL; Boehnke M; Collins FS; Parker SC; Stitzel ML
Proc Natl Acad Sci U S A; 2017 Feb; 114(9):2301-2306. PubMed ID: 28193859
[TBL] [Abstract][Full Text] [Related]
20. Genome-wide analysis of PDX1 target genes in human pancreatic progenitors.
Wang X; Sterr M; Burtscher I; Chen S; Hieronimus A; Machicao F; Staiger H; Häring HU; Lederer G; Meitinger T; Cernilogar FM; Schotta G; Irmler M; Beckers J; Hrabě de Angelis M; Ray M; Wright CVE; Bakhti M; Lickert H
Mol Metab; 2018 Mar; 9():57-68. PubMed ID: 29396371
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
