BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 37169774)

  • 1. Alternative promoters in CpG depleted regions are prevalently associated with epigenetic misregulation of liver cancer transcriptomes.
    Nepal C; Andersen JB
    Nat Commun; 2023 May; 14(1):2712. PubMed ID: 37169774
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Contrasting chromatin organization of CpG islands and exons in the human genome.
    Choi JK
    Genome Biol; 2010; 11(7):R70. PubMed ID: 20602769
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Putative promoters within gene bodies control exon expression via TET1-mediated H3K36 methylation.
    Ma L; Muhammad T; Wang H; Du G; Sakhawat A; Wei Y; Ali Khan A; Cong X; Huang Y
    J Cell Physiol; 2020 Oct; 235(10):6711-6724. PubMed ID: 31994732
    [TBL] [Abstract][Full Text] [Related]  

  • 4. DNA methylation directly silences genes with non-CpG island promoters and establishes a nucleosome occupied promoter.
    Han H; Cortez CC; Yang X; Nichols PW; Jones PA; Liang G
    Hum Mol Genet; 2011 Nov; 20(22):4299-310. PubMed ID: 21835883
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DNA methylation determines nucleosome occupancy in the 5'-CpG islands of tumor suppressor genes.
    Portela A; Liz J; Nogales V; Setién F; Villanueva A; Esteller M
    Oncogene; 2013 Nov; 32(47):5421-8. PubMed ID: 23686312
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DNA methylation patterns suggest the involvement of DNMT3B and TET1 in osteosarcoma development.
    Pires SF; de Barros JS; da Costa SS; de Oliveira Scliar M; Van Helvoort Lengert A; Boldrini É; da Silva SRM; Tasic L; Vidal DO; Krepischi ACV; Maschietto M
    Mol Genet Genomics; 2023 May; 298(3):721-733. PubMed ID: 37020053
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq).
    Rhie SK; Schreiner S; Farnham PJ
    Methods Mol Biol; 2018; 1766():209-229. PubMed ID: 29605855
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Conserved role of intragenic DNA methylation in regulating alternative promoters.
    Maunakea AK; Nagarajan RP; Bilenky M; Ballinger TJ; D'Souza C; Fouse SD; Johnson BE; Hong C; Nielsen C; Zhao Y; Turecki G; Delaney A; Varhol R; Thiessen N; Shchors K; Heine VM; Rowitch DH; Xing X; Fiore C; Schillebeeckx M; Jones SJ; Haussler D; Marra MA; Hirst M; Wang T; Costello JF
    Nature; 2010 Jul; 466(7303):253-7. PubMed ID: 20613842
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Relationship between gene body DNA methylation and intragenic H3K9me3 and H3K36me3 chromatin marks.
    Hahn MA; Wu X; Li AX; Hahn T; Pfeifer GP
    PLoS One; 2011 Apr; 6(4):e18844. PubMed ID: 21526191
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Decrease of 5hmC in gastric cancers is associated with TET1 silencing due to with DNA methylation and bivalent histone marks at TET1 CpG island 3'-shore.
    Park JL; Kim HJ; Seo EH; Kwon OH; Lim B; Kim M; Kim SY; Song KS; Kang GH; Kim HJ; Choi BY; Kim YS
    Oncotarget; 2015 Nov; 6(35):37647-62. PubMed ID: 26462176
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TET1 Depletion Induces Aberrant CpG Methylation in Colorectal Cancer Cells.
    Kai M; Niinuma T; Kitajima H; Yamamoto E; Harada T; Aoki H; Maruyama R; Toyota M; Sasaki Y; Sugai T; Tokino T; Nakase H; Suzuki H
    PLoS One; 2016; 11(12):e0168281. PubMed ID: 27977763
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation.
    Baubec T; Colombo DF; Wirbelauer C; Schmidt J; Burger L; Krebs AR; Akalin A; Schübeler D
    Nature; 2015 Apr; 520(7546):243-7. PubMed ID: 25607372
    [TBL] [Abstract][Full Text] [Related]  

  • 13. GADD45A binds R-loops and recruits TET1 to CpG island promoters.
    Arab K; Karaulanov E; Musheev M; Trnka P; Schäfer A; Grummt I; Niehrs C
    Nat Genet; 2019 Feb; 51(2):217-223. PubMed ID: 30617255
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Aberrant CpG Methylation Mediates Abnormal Transcription of MAO-A Induced by Acute and Chronic L-3,4-Dihydroxyphenylalanine Administration in SH-SY5Y Neuronal Cells.
    Yang Z; Wang X; Yang J; Sun M; Wang Y; Wang X
    Neurotox Res; 2017 Apr; 31(3):334-347. PubMed ID: 27981510
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Epigenetic inactivation of the CpG demethylase TET1 as a DNA methylation feedback loop in human cancers.
    Li L; Li C; Mao H; Du Z; Chan WY; Murray P; Luo B; Chan AT; Mok TS; Chan FK; Ambinder RF; Tao Q
    Sci Rep; 2016 May; 6():26591. PubMed ID: 27225590
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The role of DNA methylation in directing the functional organization of the cancer epigenome.
    Lay FD; Liu Y; Kelly TK; Witt H; Farnham PJ; Jones PA; Berman BP
    Genome Res; 2015 Apr; 25(4):467-77. PubMed ID: 25747664
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Extreme HOT regions are CpG-dense promoters in C. elegans and humans.
    Chen RA; Stempor P; Down TA; Zeiser E; Feuer SK; Ahringer J
    Genome Res; 2014 Jul; 24(7):1138-46. PubMed ID: 24653213
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Differential regulation of CpG island methylation within divergent and unidirectional promoters in colorectal cancer.
    Namba S; Sato K; Kojima S; Ueno T; Yamamoto Y; Tanaka Y; Inoue S; Nagae G; Iinuma H; Hazama S; Ishihara S; Aburatani H; Mano H; Kawazu M
    Cancer Sci; 2019 Mar; 110(3):1096-1104. PubMed ID: 30637877
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Nucleosome dynamics and maintenance of epigenetic states of CpG islands.
    Sneppen K; Dodd IB
    Phys Rev E; 2016 Jun; 93(6):062417. PubMed ID: 27415308
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DNA-methyltransferase1 (DNMT1) binding to CpG rich GABAergic and BDNF promoters is increased in the brain of schizophrenia and bipolar disorder patients.
    Dong E; Ruzicka WB; Grayson DR; Guidotti A
    Schizophr Res; 2015 Sep; 167(1-3):35-41. PubMed ID: 25476119
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.