207 related articles for article (PubMed ID: 37173651)
1. Integration of ATAC-Seq and RNA-Seq reveals FOSL2 drives human liver progenitor-like cell aging by regulating inflammatory factors.
Ding M; Huang W; Liu G; Zhai B; Yan H; Zhang Y
BMC Genomics; 2023 May; 24(1):260. PubMed ID: 37173651
[TBL] [Abstract][Full Text] [Related]
2. Genome-Wide Analysis of Yeast Metabolic Cycle through Metabolic Network Models Reveals Superiority of Integrated ATAC-seq Data over RNA-seq Data.
Cesur MF; Çakır T; Pir P
mSystems; 2022 Jun; 7(3):e0134721. PubMed ID: 35695574
[TBL] [Abstract][Full Text] [Related]
3. Integrating ATAC-seq and RNA-seq Reveals the Dynamics of Chromatin Accessibility and Gene Expression in Apple Response to Drought.
Wang S; He J; Deng M; Wang C; Wang R; Yan J; Luo M; Ma F; Guan Q; Xu J
Int J Mol Sci; 2022 Sep; 23(19):. PubMed ID: 36232500
[TBL] [Abstract][Full Text] [Related]
4. Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads.
De Rop FV; Ismail JN; Bravo González-Blas C; Hulselmans GJ; Flerin CC; Janssens J; Theunis K; Christiaens VM; Wouters J; Marcassa G; de Wit J; Poovathingal S; Aerts S
Elife; 2022 Feb; 11():. PubMed ID: 35195064
[TBL] [Abstract][Full Text] [Related]
5. Integration of ATAC-seq and RNA-seq identifies MX1-mediated AP-1 transcriptional regulation as a therapeutic target for Down syndrome.
Guo Z; Zhu Y; Xiao H; Dai R; Yang W; Xue W; Zhang X; Hao B; Liao S
Biol Res; 2023 Dec; 56(1):67. PubMed ID: 38066591
[TBL] [Abstract][Full Text] [Related]
6. Integrated analysis of ATAC-seq and RNA-seq reveals the transcriptional regulation network in SLE.
Wu J; Li Y; Feng D; Yu Y; Long H; Hu Z; Lu Q; Zhao M
Int Immunopharmacol; 2023 Mar; 116():109803. PubMed ID: 36738683
[TBL] [Abstract][Full Text] [Related]
7. Harnessing changes in open chromatin determined by ATAC-seq to generate insulin-responsive reporter constructs.
Merrill CB; Montgomery AB; Pabon MA; Shabalin AA; Rodan AR; Rothenfluh A
BMC Genomics; 2022 May; 23(1):399. PubMed ID: 35614386
[TBL] [Abstract][Full Text] [Related]
8. Exploring Chromatin Accessibility in Mouse Epiblast Stem Cells with ATAC-Seq.
Salehin N; Santucci N; Osteil P; Tam PPL
Methods Mol Biol; 2022; 2490():93-100. PubMed ID: 35486242
[TBL] [Abstract][Full Text] [Related]
9. [Advances in assay for transposase-accessible chromatin with high-throughput sequencing].
Wu J; Quan JP; Ye Y; Wu ZF; Yang J; Yang M; Zheng EQ
Yi Chuan; 2020 Apr; 42(4):333-346. PubMed ID: 32312702
[TBL] [Abstract][Full Text] [Related]
10. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
[TBL] [Abstract][Full Text] [Related]
11. Chromatin accessibility profiling by ATAC-seq.
Grandi FC; Modi H; Kampman L; Corces MR
Nat Protoc; 2022 Jun; 17(6):1518-1552. PubMed ID: 35478247
[TBL] [Abstract][Full Text] [Related]
12. ATAC-seq Optimization for Cancer Epigenetics Research.
Cooper M; Ray A; Bhattacharya A; Dhasarathy A; Takaku M
J Vis Exp; 2022 Jun; (184):. PubMed ID: 35848835
[TBL] [Abstract][Full Text] [Related]
13. Cell type-specific chromatin accessibility analysis in the mouse and human brain.
Rocks D; Jaric I; Tesfa L; Greally JM; Suzuki M; Kundakovic M
Epigenetics; 2022; 17(2):202-219. PubMed ID: 33775205
[TBL] [Abstract][Full Text] [Related]
14. AIAP: A Quality Control and Integrative Analysis Package to Improve ATAC-seq Data Analysis.
Liu S; Li D; Lyu C; Gontarz PM; Miao B; Madden PAF; Wang T; Zhang B
Genomics Proteomics Bioinformatics; 2021 Aug; 19(4):641-651. PubMed ID: 34273560
[TBL] [Abstract][Full Text] [Related]
15. Dissecting the Epigenome Driving Drug Resistance by ATAC-Seq.
de Nicola F; Corleone G; Goeman F
Methods Mol Biol; 2022; 2535():171-185. PubMed ID: 35867231
[TBL] [Abstract][Full Text] [Related]
16. Systematic alteration of ATAC-seq for profiling open chromatin in cryopreserved nuclei preparations from livestock tissues.
Halstead MM; Kern C; Saelao P; Chanthavixay G; Wang Y; Delany ME; Zhou H; Ross PJ
Sci Rep; 2020 Mar; 10(1):5230. PubMed ID: 32251359
[TBL] [Abstract][Full Text] [Related]
17. ATAC-Seq Analysis of Accessible Chromatin: From Experimental Steps to Data Analysis.
Tatara M; Ikeda T; Namekawa SH; Maezawa S
Methods Mol Biol; 2023; 2577():65-81. PubMed ID: 36173566
[TBL] [Abstract][Full Text] [Related]
18. Mapping Chromatin Accessibility in Human Naïve Pluripotent Stem Cells Using ATAC-Seq.
Cinkornpumin JK; Hossain I; Pastor WA
Methods Mol Biol; 2022; 2416():201-211. PubMed ID: 34870838
[TBL] [Abstract][Full Text] [Related]
19. Protocol for chromatin accessibility profiling of human endothelial cells cultured under fluid shear stress using ATAC-seq.
Raaz L; Mendez PL; Mundlos S; Knaus P; Jatzlau J
STAR Protoc; 2024 Mar; 5(1):102859. PubMed ID: 38329877
[TBL] [Abstract][Full Text] [Related]
20. Visualization of the landscape of the read alignment shape of ATAC-seq data using Hellinger distance metric.
Cheng JH; Zheng C; Yamada R; Okada D
Genes Cells; 2024 Jan; 29(1):5-16. PubMed ID: 37989133
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
