162 related articles for article (PubMed ID: 37184853)
1. A Clonal Evolution Simulator for Planning Somatic Evolution Studies.
Srivatsa A; Lei H; Schwartz R
J Comput Biol; 2023 Aug; 30(8):831-847. PubMed ID: 37184853
[TBL] [Abstract][Full Text] [Related]
2. SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution.
Xia LC; Ai D; Lee H; Andor N; Li C; Zhang NR; Ji HP
Gigascience; 2018 Jul; 7(7):. PubMed ID: 29982625
[TBL] [Abstract][Full Text] [Related]
3. Optimizing Design of Genomics Studies for Clonal Evolution Analysis.
Srivatsa A; Schwartz R
bioRxiv; 2024 Mar; ():. PubMed ID: 38559253
[TBL] [Abstract][Full Text] [Related]
4. Integrating genetic and non-genetic determinants of cancer evolution by single-cell multi-omics.
Nam AS; Chaligne R; Landau DA
Nat Rev Genet; 2021 Jan; 22(1):3-18. PubMed ID: 32807900
[TBL] [Abstract][Full Text] [Related]
5. Assessing intratumor heterogeneity and tracking longitudinal and spatial clonal evolutionary history by next-generation sequencing.
Jiang Y; Qiu Y; Minn AJ; Zhang NR
Proc Natl Acad Sci U S A; 2016 Sep; 113(37):E5528-37. PubMed ID: 27573852
[TBL] [Abstract][Full Text] [Related]
6. Measuring Clonal Evolution in Cancer with Genomics.
Williams MJ; Sottoriva A; Graham TA
Annu Rev Genomics Hum Genet; 2019 Aug; 20():309-329. PubMed ID: 31059289
[TBL] [Abstract][Full Text] [Related]
7. Inferring clonal evolution of tumors from single nucleotide somatic mutations.
Jiao W; Vembu S; Deshwar AG; Stein L; Morris Q
BMC Bioinformatics; 2014 Feb; 15():35. PubMed ID: 24484323
[TBL] [Abstract][Full Text] [Related]
8. Exploring the Link between the Germline and Somatic Genome in Cancer.
Geeleher P; Huang RS
Cancer Discov; 2017 Apr; 7(4):354-355. PubMed ID: 28373166
[TBL] [Abstract][Full Text] [Related]
9. SubClonal Hierarchy Inference from Somatic Mutations: Automatic Reconstruction of Cancer Evolutionary Trees from Multi-region Next Generation Sequencing.
Niknafs N; Beleva-Guthrie V; Naiman DQ; Karchin R
PLoS Comput Biol; 2015 Oct; 11(10):e1004416. PubMed ID: 26436540
[TBL] [Abstract][Full Text] [Related]
10. IntSIM: An Integrated Simulator of Next-Generation Sequencing Data.
Yuan X; Zhang J; Yang L
IEEE Trans Biomed Eng; 2017 Feb; 64(2):441-451. PubMed ID: 27164567
[TBL] [Abstract][Full Text] [Related]
11. Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics.
Morita K; Wang F; Jahn K; Hu T; Tanaka T; Sasaki Y; Kuipers J; Loghavi S; Wang SA; Yan Y; Furudate K; Matthews J; Little L; Gumbs C; Zhang J; Song X; Thompson E; Patel KP; Bueso-Ramos CE; DiNardo CD; Ravandi F; Jabbour E; Andreeff M; Cortes J; Bhalla K; Garcia-Manero G; Kantarjian H; Konopleva M; Nakada D; Navin N; Beerenwinkel N; Futreal PA; Takahashi K
Nat Commun; 2020 Oct; 11(1):5327. PubMed ID: 33087716
[TBL] [Abstract][Full Text] [Related]
12. Chromosome Instability through the Ages: Parallels between Speciation and Somatic (Cancer) Evolution.
MacDonald C; McClelland SE
Trends Genet; 2021 Aug; 37(8):691-694. PubMed ID: 34083067
[TBL] [Abstract][Full Text] [Related]
13. A compartment size-dependent selective threshold limits mutation accumulation in hierarchical tissues.
Grajzel D; Derényi I; Szöllősi GJ
Proc Natl Acad Sci U S A; 2020 Jan; 117(3):1606-1611. PubMed ID: 31907322
[TBL] [Abstract][Full Text] [Related]
14. Hotspot mutation panel testing reveals clonal evolution in a study of 265 paired primary and metastatic tumors.
Goswami RS; Patel KP; Singh RR; Meric-Bernstam F; Kopetz ES; Subbiah V; Alvarez RH; Davies MA; Jabbar KJ; Roy-Chowdhuri S; Lazar AJ; Medeiros LJ; Broaddus RR; Luthra R; Routbort MJ
Clin Cancer Res; 2015 Jun; 21(11):2644-51. PubMed ID: 25695693
[TBL] [Abstract][Full Text] [Related]
15. Sc-TUSV-ext: Single-cell clonal lineage inference from single nucleotide variants (SNV), copy number alterations (CNA) and structural variants (SV).
Bristy NA; Fu X; Schwartz R
bioRxiv; 2023 Dec; ():. PubMed ID: 38106049
[TBL] [Abstract][Full Text] [Related]
16. Clonal Evolution in Multiple Myeloma.
Fakhri B; Vij R
Clin Lymphoma Myeloma Leuk; 2016 Aug; 16 Suppl():S130-4. PubMed ID: 27521309
[TBL] [Abstract][Full Text] [Related]
17. Somatic variant analysis suite: copy number variation clonal visualization online platform for large-scale single-cell genomics.
Chen L; Qing Y; Li R; Li C; Li H; Feng X; Li SC
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34671807
[TBL] [Abstract][Full Text] [Related]
18. An Individualized Approach for Somatic Variant Discovery.
Li M; He T; Cao C; Long Q
Methods Mol Biol; 2020; 2120():11-36. PubMed ID: 32124309
[TBL] [Abstract][Full Text] [Related]
19. The clonal evolution during long-term clinical course of multiple myeloma.
Mishima Y; Mishima Y; Shirouchi Y; Nishimura N; Yokoyama M; Okabe T; Inoue N; Uryu H; Fukuta T; Hatake K; Terui Y
Int J Hematol; 2021 Feb; 113(2):279-284. PubMed ID: 32864713
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]