These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

198 related articles for article (PubMed ID: 37200156)

  • 41. Recursive MAGUS: Scalable and accurate multiple sequence alignment.
    Smirnov V
    PLoS Comput Biol; 2021 Oct; 17(10):e1008950. PubMed ID: 34613974
    [TBL] [Abstract][Full Text] [Related]  

  • 42. OMAmer: tree-driven and alignment-free protein assignment to subfamilies outperforms closest sequence approaches.
    Rossier V; Warwick Vesztrocy A; Robinson-Rechavi M; Dessimoz C
    Bioinformatics; 2021 Sep; 37(18):2866-2873. PubMed ID: 33787851
    [TBL] [Abstract][Full Text] [Related]  

  • 43. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
    Bininda-Emonds OR
    BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Multiple Sequence Alignment Computation Using the T-Coffee Regressive Algorithm Implementation.
    Garriga E; Di Tommaso P; Magis C; Erb I; Mansouri L; Baltzis A; Floden E; Notredame C
    Methods Mol Biol; 2021; 2231():89-97. PubMed ID: 33289888
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Fast and SNP-aware short read alignment with SALT.
    Quan W; Liu B; Wang Y
    BMC Bioinformatics; 2021 Aug; 22(Suppl 9):172. PubMed ID: 34433415
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm.
    Löytynoja A; Vilella AJ; Goldman N
    Bioinformatics; 2012 Jul; 28(13):1684-91. PubMed ID: 22531217
    [TBL] [Abstract][Full Text] [Related]  

  • 47. UPP2: fast and accurate alignment of datasets with fragmentary sequences.
    Park M; Ivanovic S; Chu G; Shen C; Warnow T
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36625535
    [TBL] [Abstract][Full Text] [Related]  

  • 48. SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny.
    Galtier N; Gouy M; Gautier C
    Comput Appl Biosci; 1996 Dec; 12(6):543-8. PubMed ID: 9021275
    [TBL] [Abstract][Full Text] [Related]  

  • 49. MAGUS: Multiple sequence Alignment using Graph clUStering.
    Smirnov V; Warnow T
    Bioinformatics; 2021 Jul; 37(12):1666-1672. PubMed ID: 33252662
    [TBL] [Abstract][Full Text] [Related]  

  • 50. AncestralClust: clustering of divergent nucleotide sequences by ancestral sequence reconstruction using phylogenetic trees.
    Pipes L; Nielsen R
    Bioinformatics; 2022 Jan; 38(3):663-670. PubMed ID: 34668516
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Seaview Version 5: A Multiplatform Software for Multiple Sequence Alignment, Molecular Phylogenetic Analyses, and Tree Reconciliation.
    Gouy M; Tannier E; Comte N; Parsons DP
    Methods Mol Biol; 2021; 2231():241-260. PubMed ID: 33289897
    [TBL] [Abstract][Full Text] [Related]  

  • 52. A weighting system and algorithm for aligning many phylogenetically related sequences.
    Gotoh O
    Comput Appl Biosci; 1995 Oct; 11(5):543-51. PubMed ID: 8590178
    [TBL] [Abstract][Full Text] [Related]  

  • 53. T-Coffee: A novel method for fast and accurate multiple sequence alignment.
    Notredame C; Higgins DG; Heringa J
    J Mol Biol; 2000 Sep; 302(1):205-17. PubMed ID: 10964570
    [TBL] [Abstract][Full Text] [Related]  

  • 54. MUSCLE: a multiple sequence alignment method with reduced time and space complexity.
    Edgar RC
    BMC Bioinformatics; 2004 Aug; 5():113. PubMed ID: 15318951
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Inferring the genetic variability in Indian SARS-CoV-2 genomes using consensus of multiple sequence alignment techniques.
    Saha I; Ghosh N; Maity D; Sharma N; Mitra K
    Infect Genet Evol; 2020 Nov; 85():104522. PubMed ID: 32889094
    [TBL] [Abstract][Full Text] [Related]  

  • 56. HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching.
    Bi G; Mao Y; Xing Q; Cao M
    Genomics; 2018 Jan; 110(1):18-22. PubMed ID: 28780378
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Grammar-based distance in progressive multiple sequence alignment.
    Russell DJ; Otu HH; Sayood K
    BMC Bioinformatics; 2008 Jul; 9():306. PubMed ID: 18616828
    [TBL] [Abstract][Full Text] [Related]  

  • 58. PVTree: A Sequential Pattern Mining Method for Alignment Independent Phylogeny Reconstruction.
    Kang Y; Yang X; Lin J; Ye K
    Genes (Basel); 2019 Jan; 10(2):. PubMed ID: 30678245
    [TBL] [Abstract][Full Text] [Related]  

  • 59. The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.
    Treangen TJ; Ondov BD; Koren S; Phillippy AM
    Genome Biol; 2014; 15(11):524. PubMed ID: 25410596
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.
    Fouquier J; Rideout JR; Bolyen E; Chase J; Shiffer A; McDonald D; Knight R; Caporaso JG; Kelley ST
    Microbiome; 2016 Feb; 4():11. PubMed ID: 26905735
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.