These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

302 related articles for article (PubMed ID: 37217943)

  • 1. In silico methods for predicting functional synonymous variants.
    Lin BC; Katneni U; Jankowska KI; Meyer D; Kimchi-Sarfaty C
    Genome Biol; 2023 May; 24(1):126. PubMed ID: 37217943
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Investigating DNA-, RNA-, and protein-based features as a means to discriminate pathogenic synonymous variants.
    Livingstone M; Folkman L; Yang Y; Zhang P; Mort M; Cooper DN; Liu Y; Stantic B; Zhou Y
    Hum Mutat; 2017 Oct; 38(10):1336-1347. PubMed ID: 28649752
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Whole genome sequencing of 35 individuals provides insights into the genetic architecture of Korean population.
    Zhang W; Meehan J; Su Z; Ng HW; Shu M; Luo H; Ge W; Perkins R; Tong W; Hong H
    BMC Bioinformatics; 2014; 15 Suppl 11(Suppl 11):S6. PubMed ID: 25350283
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Evaluation of computational techniques for predicting non-synonymous single nucleotide variants pathogenicity.
    Hassan MS; Shaalan AA; Dessouky MI; Abdelnaiem AE; ElHefnawi M
    Genomics; 2019 Jul; 111(4):869-882. PubMed ID: 29842949
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Identification of deleterious synonymous variants in human genomes.
    Buske OJ; Manickaraj A; Mital S; Ray PN; Brudno M
    Bioinformatics; 2013 Aug; 29(15):1843-50. PubMed ID: 23736532
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Multilayer View of Pathogenic SNVs in Human Interactome through In Silico Edgetic Profiling.
    Cui H; Zhao N; Korkin D
    J Mol Biol; 2018 Sep; 430(18 Pt A):2974-2992. PubMed ID: 30017919
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A review study: Computational techniques for expecting the impact of non-synonymous single nucleotide variants in human diseases.
    Hassan MS; Shaalan AA; Dessouky MI; Abdelnaiem AE; ElHefnawi M
    Gene; 2019 Jan; 680():20-33. PubMed ID: 30240882
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Machine learning random forest for predicting oncosomatic variant NGS analysis.
    Pellegrino E; Jacques C; Beaufils N; Nanni I; Carlioz A; Metellus P; Ouafik L
    Sci Rep; 2021 Nov; 11(1):21820. PubMed ID: 34750410
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Inter- and intra-lineage genetic diversity of wild-type Zika viruses reveals both common and distinctive nucleotide variants and clusters of genomic diversity.
    Collins ND; Widen SG; Li L; Swetnam DM; Shi PY; Tesh RB; Sarathy VV
    Emerg Microbes Infect; 2019; 8(1):1126-1138. PubMed ID: 31355708
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Multivariate models from RNA-Seq SNVs yield candidate molecular targets for biomarker discovery: SNV-DA.
    Paul MR; Levitt NP; Moore DE; Watson PM; Wilson RC; Denlinger CE; Watson DK; Anderson PE
    BMC Genomics; 2016 Mar; 17():263. PubMed ID: 27029813
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An Ensemble Approach to Predict the Pathogenicity of Synonymous Variants.
    Ranganathan Ganakammal S; Alexov E
    Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967157
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Inferring Potential Cancer Driving Synonymous Variants.
    Zeng Z; Bromberg Y
    Genes (Basel); 2022 Apr; 13(5):. PubMed ID: 35627162
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Implementing computational methods in tandem with synonymous gene recoding for therapeutic development.
    Lin BC; Kaissarian NM; Kimchi-Sarfaty C
    Trends Pharmacol Sci; 2023 Feb; 44(2):73-84. PubMed ID: 36307252
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comprehensive characterization of somatic variants associated with intronic polyadenylation in human cancers.
    Zhao Z; Xu Q; Wei R; Huang L; Wang W; Wei G; Ni T
    Nucleic Acids Res; 2021 Oct; 49(18):10369-10381. PubMed ID: 34508351
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer.
    O'Brien TD; Jia P; Xia J; Saxena U; Jin H; Vuong H; Kim P; Wang Q; Aryee MJ; Mino-Kenudson M; Engelman JA; Le LP; Iafrate AJ; Heist RS; Pao W; Zhao Z
    Methods; 2015 Jul; 83():118-27. PubMed ID: 25913717
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Identification and characterization of human xylosyltransferase II promoter single nucleotide variants.
    Faust I; Böker KO; Eirich C; Akkermann D; Kuhn J; Knabbe C; Hendig D
    Biochem Biophys Res Commun; 2015 Mar; 458(4):901-7. PubMed ID: 25704086
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Using Machine Learning to Identify True Somatic Variants from Next-Generation Sequencing.
    Wu C; Zhao X; Welsh M; Costello K; Cao K; Abou Tayoun A; Li M; Sarmady M
    Clin Chem; 2020 Jan; 66(1):239-246. PubMed ID: 31672855
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Synonymous Variants: Necessary Nuance in Our Understanding of Cancer Drivers and Treatment Outcomes.
    Kaissarian NM; Meyer D; Kimchi-Sarfaty C
    J Natl Cancer Inst; 2022 Aug; 114(8):1072-1094. PubMed ID: 35477782
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Synonymous variants that disrupt messenger RNA structure are significantly constrained in the human population.
    Gaither JBS; Lammi GE; Li JL; Gordon DM; Kuck HC; Kelly BJ; Fitch JR; White P
    Gigascience; 2021 Apr; 10(4):. PubMed ID: 33822938
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Characterization of coding synonymous and non-synonymous variants in ADAMTS13 using ex vivo and in silico approaches.
    Edwards NC; Hing ZA; Perry A; Blaisdell A; Kopelman DB; Fathke R; Plum W; Newell J; Allen CE; S G; Shapiro A; Okunji C; Kosti I; Shomron N; Grigoryan V; Przytycka TM; Sauna ZE; Salari R; Mandel-Gutfreund Y; Komar AA; Kimchi-Sarfaty C
    PLoS One; 2012; 7(6):e38864. PubMed ID: 22768050
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.