These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
171 related articles for article (PubMed ID: 37357816)
1. Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15. Roy RS; Liu J; Giri N; Guo Z; Cheng J Proteins; 2023 Dec; 91(12):1889-1902. PubMed ID: 37357816 [TBL] [Abstract][Full Text] [Related]
2. Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15. Roy RS; Liu J; Giri N; Guo Z; Cheng J bioRxiv; 2023 Mar; ():. PubMed ID: 36945536 [TBL] [Abstract][Full Text] [Related]
3. Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15. Liu J; Guo Z; Wu T; Roy RS; Quadir F; Chen C; Cheng J bioRxiv; 2023 May; ():. PubMed ID: 37293073 [TBL] [Abstract][Full Text] [Related]
4. Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15. Liu J; Guo Z; Wu T; Roy RS; Chen C; Cheng J Commun Chem; 2023 Sep; 6(1):188. PubMed ID: 37679431 [TBL] [Abstract][Full Text] [Related]
5. Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15. Liu J; Guo Z; Wu T; Roy RS; Quadir F; Chen C; Cheng J Commun Biol; 2023 Nov; 6(1):1140. PubMed ID: 37949999 [TBL] [Abstract][Full Text] [Related]
6. Estimation of model accuracy in CASP15 using the ModFOLDdock server. Edmunds NS; Alharbi SMA; Genc AG; Adiyaman R; McGuffin LJ Proteins; 2023 Dec; 91(12):1871-1878. PubMed ID: 37314190 [TBL] [Abstract][Full Text] [Related]
7. Protein model accuracy estimation empowered by deep learning and inter-residue distance prediction in CASP14. Chen X; Liu J; Guo Z; Wu T; Hou J; Cheng J Sci Rep; 2021 May; 11(1):10943. PubMed ID: 34035363 [TBL] [Abstract][Full Text] [Related]
8. A Survey of Deep Learning Methods for Estimating the Accuracy of Protein Quaternary Structure Models. Chen X; Liu J; Park N; Cheng J Biomolecules; 2024 May; 14(5):. PubMed ID: 38785981 [TBL] [Abstract][Full Text] [Related]
9. Improving protein tertiary structure prediction by deep learning and distance prediction in CASP14. Liu J; Wu T; Guo Z; Hou J; Cheng J Proteins; 2022 Jan; 90(1):58-72. PubMed ID: 34291486 [TBL] [Abstract][Full Text] [Related]
10. Integrating deep learning, threading alignments, and a multi-MSA strategy for high-quality protein monomer and complex structure prediction in CASP15. Zheng W; Wuyun Q; Freddolino PL; Zhang Y Proteins; 2023 Dec; 91(12):1684-1703. PubMed ID: 37650367 [TBL] [Abstract][Full Text] [Related]
11. Designing and evaluating the MULTICOM protein local and global model quality prediction methods in the CASP10 experiment. Cao R; Wang Z; Cheng J BMC Struct Biol; 2014 Apr; 14():13. PubMed ID: 24731387 [TBL] [Abstract][Full Text] [Related]
12. Protein tertiary structure modeling driven by deep learning and contact distance prediction in CASP13. Hou J; Wu T; Cao R; Cheng J Proteins; 2019 Dec; 87(12):1165-1178. PubMed ID: 30985027 [TBL] [Abstract][Full Text] [Related]
13. Estimating protein complex model accuracy based on ultrafast shape recognition and deep learning in CASP15. Liu J; Liu D; He G; Zhang G Proteins; 2023 Dec; 91(12):1861-1870. PubMed ID: 37553848 [TBL] [Abstract][Full Text] [Related]
14. Assessment of protein model structure accuracy estimation in CASP13: Challenges in the era of deep learning. Won J; Baek M; Monastyrskyy B; Kryshtafovych A; Seok C Proteins; 2019 Dec; 87(12):1351-1360. PubMed ID: 31436360 [TBL] [Abstract][Full Text] [Related]
15. MULTICOM2 open-source protein structure prediction system powered by deep learning and distance prediction. Wu T; Liu J; Guo Z; Hou J; Cheng J Sci Rep; 2021 Jun; 11(1):13155. PubMed ID: 34162922 [TBL] [Abstract][Full Text] [Related]
16. Improving protein structure prediction with extended sequence similarity searches and deep-learning-based refinement in CASP15. Oda T Proteins; 2023 Dec; 91(12):1712-1723. PubMed ID: 37485822 [TBL] [Abstract][Full Text] [Related]
17. Distance-based reconstruction of protein quaternary structures from inter-chain contacts. Soltanikazemi E; Quadir F; Roy RS; Guo Z; Cheng J Proteins; 2022 Mar; 90(3):720-731. PubMed ID: 34716620 [TBL] [Abstract][Full Text] [Related]
18. Assessment of the assessment-All about complexes. Studer G; Tauriello G; Schwede T Proteins; 2023 Dec; 91(12):1850-1860. PubMed ID: 37858934 [TBL] [Abstract][Full Text] [Related]
19. A gated graph transformer for protein complex structure quality assessment and its performance in CASP15. Chen X; Morehead A; Liu J; Cheng J Bioinformatics; 2023 Jun; 39(39 Suppl 1):i308-i317. PubMed ID: 37387159 [TBL] [Abstract][Full Text] [Related]
20. The impact of AI-based modeling on the accuracy of protein assembly prediction: Insights from CASP15. Ozden B; Kryshtafovych A; Karaca E Proteins; 2023 Dec; 91(12):1636-1657. PubMed ID: 37861057 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]