BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

223 related articles for article (PubMed ID: 37378452)

  • 1. Simultaneous measurement of nascent transcriptome and translatome using 4-thiouridine metabolic RNA labeling and translating ribosome affinity purification.
    Imai H; Utsumi D; Torihara H; Takahashi K; Kuroyanagi H; Yamashita A
    Nucleic Acids Res; 2023 Aug; 51(14):e76. PubMed ID: 37378452
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A Nonradioactive Assay to Measure Production and Processing of Ribosomal RNA by 4sU-Tagging.
    Burger K; Eick D
    Methods Mol Biol; 2016; 1455():121-31. PubMed ID: 27576715
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Selective ribosome profiling as a tool to study interactions of translating ribosomes in mammalian cells.
    Günnigmann M; Koubek J; Kramer G; Bukau B
    Methods Enzymol; 2023; 684():1-38. PubMed ID: 37230585
    [TBL] [Abstract][Full Text] [Related]  

  • 4. 4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response.
    Burger K; Mühl B; Kellner M; Rohrmoser M; Gruber-Eber A; Windhager L; Friedel CC; Dölken L; Eick D
    RNA Biol; 2013 Oct; 10(10):1623-30. PubMed ID: 24025460
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Translating Ribosome Affinity Purification (TRAP) followed by RNA sequencing technology (TRAP-SEQ) for quantitative assessment of plant translatomes.
    Reynoso MA; Juntawong P; Lancia M; Blanco FA; Bailey-Serres J; Zanetti ME
    Methods Mol Biol; 2015; 1284():185-207. PubMed ID: 25757773
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Combined analyses of translatome and transcriptome in Arabidopsis reveal new players responding to magnesium deficiency.
    Li Y; Li Q; Beuchat G; Zeng H; Zhang C; Chen LQ
    J Integr Plant Biol; 2021 Dec; 63(12):2075-2092. PubMed ID: 34473403
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Translatome profiling: methods for genome-scale analysis of mRNA translation.
    King HA; Gerber AP
    Brief Funct Genomics; 2016 Jan; 15(1):22-31. PubMed ID: 25380596
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Translational changes induced by acute sleep deprivation uncovered by TRAP-Seq.
    Lyons LC; Chatterjee S; Vanrobaeys Y; Gaine ME; Abel T
    Mol Brain; 2020 Dec; 13(1):165. PubMed ID: 33272296
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A split green fluorescent protein system to enhance spatial and temporal sensitivity of translating ribosome affinity purification.
    Dinkeloo K; Pelly Z; McDowell JM; Pilot G
    Plant J; 2022 Jul; 111(1):304-315. PubMed ID: 35436375
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Exploring Ribosome-Positioning on Translating Transcripts with Ribosome Profiling.
    Cope AL; Vellappan S; Favate JS; Skalenko KS; Yadavalli SS; Shah P
    Methods Mol Biol; 2022; 2404():83-110. PubMed ID: 34694605
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Translating Ribosome Affinity Purification (TRAP) of Cell Type-specific mRNA from Mouse Brain Lysates.
    Salussolia CL; Winden KD; Sahin M
    Bio Protoc; 2022 May; 12(9):e4407. PubMed ID: 35800463
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Quantification of mRNA ribosomal engagement in human neurons using parallel translating ribosome affinity purification (TRAP) and RNA sequencing.
    Rodrigues DC; Mufteev M; Ellis J
    STAR Protoc; 2021 Mar; 2(1):100229. PubMed ID: 33364619
    [TBL] [Abstract][Full Text] [Related]  

  • 13. TRAP-rc, Translating Ribosome Affinity Purification from Rare Cell Populations of Drosophila Embryos.
    Bertin B; Renaud Y; Aradhya R; Jagla K; Junion G
    J Vis Exp; 2015 Sep; (103):. PubMed ID: 26381166
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Ribosome regulation by the nascent peptide.
    Lovett PS; Rogers EJ
    Microbiol Rev; 1996 Jun; 60(2):366-85. PubMed ID: 8801438
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Nascent Ribo-Seq measures ribosomal loading time and reveals kinetic impact on ribosome density.
    Schott J; Reitter S; Lindner D; Grosser J; Bruer M; Shenoy A; Geiger T; Mathes A; Dobreva G; Stoecklin G
    Nat Methods; 2021 Sep; 18(9):1068-1074. PubMed ID: 34480152
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Conserved Upstream Open Reading Frame Nascent Peptides That Control Translation.
    Dever TE; Ivanov IP; Sachs MS
    Annu Rev Genet; 2020 Nov; 54():237-264. PubMed ID: 32870728
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Isolation of Newly Transcribed RNA Using the Metabolic Label 4-Thiouridine.
    Garibaldi A; Carranza F; Hertel KJ
    Methods Mol Biol; 2017; 1648():169-176. PubMed ID: 28766297
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Translating ribosome affinity purification (TRAP) for cell-specific translation profiling in developing flowers.
    Wang Y; Jiao Y
    Methods Mol Biol; 2014; 1110():323-8. PubMed ID: 24395267
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Association of protein biogenesis factors at the yeast ribosomal tunnel exit is affected by the translational status and nascent polypeptide sequence.
    Raue U; Oellerer S; Rospert S
    J Biol Chem; 2007 Mar; 282(11):7809-16. PubMed ID: 17229726
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification.
    Zhou P; Zhang Y; Ma Q; Gu F; Day DS; He A; Zhou B; Li J; Stevens SM; Romo D; Pu WT
    Proc Natl Acad Sci U S A; 2013 Sep; 110(38):15395-400. PubMed ID: 24003143
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.