These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
83. Polynomial algebra of discrete models in systems biology. Veliz-Cuba A; Jarrah AS; Laubenbacher R Bioinformatics; 2010 Jul; 26(13):1637-43. PubMed ID: 20448137 [TBL] [Abstract][Full Text] [Related]
84. CRA toolbox: software package for conditional robustness analysis of cancer systems biology models in MATLAB. Bianconi F; Antonini C; Tomassoni L; Valigi P BMC Bioinformatics; 2019 Jul; 20(1):385. PubMed ID: 31288758 [TBL] [Abstract][Full Text] [Related]
85. Logical Reduction of Biological Networks to Their Most Determinative Components. Matache MT; Matache V Bull Math Biol; 2016 Jul; 78(7):1520-45. PubMed ID: 27417985 [TBL] [Abstract][Full Text] [Related]
86. NeoFox: annotating neoantigen candidates with neoantigen features. Lang F; Riesgo-Ferreiro P; Löwer M; Sahin U; Schrörs B Bioinformatics; 2021 Nov; 37(22):4246-4247. PubMed ID: 33970219 [TBL] [Abstract][Full Text] [Related]
87. A scalable and integrative system for pathway bioinformatics and systems biology. Compani B; Su T; Chang I; Cheng J; Shah KH; Whisenant T; Dou Y; Bergmann A; Cheong R; Wold B; Bardwell L; Levchenko A; Baldi P; Mjolsness E Adv Exp Med Biol; 2010; 680():523-34. PubMed ID: 20865537 [TBL] [Abstract][Full Text] [Related]
88. Computing Integrated Information ( Gomez JD; Mayner WGP; Beheler-Amass M; Tononi G; Albantakis L Entropy (Basel); 2020 Dec; 23(1):. PubMed ID: 33375068 [TBL] [Abstract][Full Text] [Related]
89. Parameter identifiability-based optimal observation remedy for biological networks. Wang Y; Miao H BMC Syst Biol; 2017 May; 11(1):53. PubMed ID: 28472965 [TBL] [Abstract][Full Text] [Related]
90. The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks. Naldi A; Hernandez C; Levy N; Stoll G; Monteiro PT; Chaouiya C; Helikar T; Zinovyev A; Calzone L; Cohen-Boulakia S; Thieffry D; Paulevé L Front Physiol; 2018; 9():680. PubMed ID: 29971009 [TBL] [Abstract][Full Text] [Related]
91. BEM: Mining Coregulation Patterns in Transcriptomics via Boolean Matrix Factorization. Liang L; Zhu K; Lu S Bioinformatics; 2020 Jul; 36(13):4030-4037. PubMed ID: 31913438 [TBL] [Abstract][Full Text] [Related]
92. MERRIN: MEtabolic regulation rule INference from time series data. Thuillier K; Baroukh C; Bockmayr A; Cottret L; Paulevé L; Siegel A Bioinformatics; 2022 Sep; 38(Suppl_2):ii127-ii133. PubMed ID: 36124795 [TBL] [Abstract][Full Text] [Related]
94. BooleSim: an interactive Boolean network simulator. Bock M; Scharp T; Talnikar C; Klipp E Bioinformatics; 2014 Jan; 30(1):131-2. PubMed ID: 24078712 [TBL] [Abstract][Full Text] [Related]
95. GENECI: A novel evolutionary machine learning consensus-based approach for the inference of gene regulatory networks. Segura-Ortiz A; García-Nieto J; Aldana-Montes JF; Navas-Delgado I Comput Biol Med; 2023 Mar; 155():106653. PubMed ID: 36803795 [TBL] [Abstract][Full Text] [Related]
96. An Efficient and Very Accurate Method for Calculating Steady-State Sensitivities in Metabolic Reaction Systems. Shiraishi F; Yoshida E; Voit EO IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(6):1077-86. PubMed ID: 26357045 [TBL] [Abstract][Full Text] [Related]