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6. Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples. Díaz-Gay M; Vila-Casadesús M; Franch-Expósito S; Hernández-Illán E; Lozano JJ; Castellví-Bel S BMC Bioinformatics; 2018 Jun; 19(1):224. PubMed ID: 29898651 [TBL] [Abstract][Full Text] [Related]
7. Mutational spectra and mutational signatures: Insights into cancer aetiology and mechanisms of DNA damage and repair. Phillips DH DNA Repair (Amst); 2018 Nov; 71():6-11. PubMed ID: 30236628 [TBL] [Abstract][Full Text] [Related]
8. Unravelling the instability of mutational signatures extraction Pancotti C; Rollo C; Birolo G; Benevenuta S; Fariselli P; Sanavia T Front Genet; 2022; 13():1049501. PubMed ID: 36685831 [TBL] [Abstract][Full Text] [Related]
9. Analysis of mutational signatures with yet another package for signature analysis. Hübschmann D; Jopp-Saile L; Andresen C; Krämer S; Gu Z; Heilig CE; Kreutzfeldt S; Teleanu V; Fröhling S; Eils R; Schlesner M Genes Chromosomes Cancer; 2021 May; 60(5):314-331. PubMed ID: 33222322 [TBL] [Abstract][Full Text] [Related]
10. FIREVAT: finding reliable variants without artifacts in human cancer samples using etiologically relevant mutational signatures. Kim H; Lee AJ; Lee J; Chun H; Ju YS; Hong D Genome Med; 2019 Dec; 11(1):81. PubMed ID: 31847917 [TBL] [Abstract][Full Text] [Related]
11. The Mutational Signature Comprehensive Analysis Toolkit (musicatk) for the Discovery, Prediction, and Exploration of Mutational Signatures. Chevalier A; Yang S; Khurshid Z; Sahelijo N; Tong T; Huggins JH; Yajima M; Campbell JD Cancer Res; 2021 Dec; 81(23):5813-5817. PubMed ID: 34625425 [TBL] [Abstract][Full Text] [Related]
12. A framework for mutational signature analysis based on DNA shape parameters. Karolak A; Levatić J; Supek F PLoS One; 2022; 17(1):e0262495. PubMed ID: 35015788 [TBL] [Abstract][Full Text] [Related]
13. Signatures of mutational processes in human cancer. Alexandrov LB; Nik-Zainal S; Wedge DC; Aparicio SA; Behjati S; Biankin AV; Bignell GR; Bolli N; Borg A; Børresen-Dale AL; Boyault S; Burkhardt B; Butler AP; Caldas C; Davies HR; Desmedt C; Eils R; Eyfjörd JE; Foekens JA; Greaves M; Hosoda F; Hutter B; Ilicic T; Imbeaud S; Imielinski M; Jäger N; Jones DT; Jones D; Knappskog S; Kool M; Lakhani SR; López-Otín C; Martin S; Munshi NC; Nakamura H; Northcott PA; Pajic M; Papaemmanuil E; Paradiso A; Pearson JV; Puente XS; Raine K; Ramakrishna M; Richardson AL; Richter J; Rosenstiel P; Schlesner M; Schumacher TN; Span PN; Teague JW; Totoki Y; Tutt AN; Valdés-Mas R; van Buuren MM; van 't Veer L; Vincent-Salomon A; Waddell N; Yates LR; ; ; ; ; Zucman-Rossi J; Futreal PA; McDermott U; Lichter P; Meyerson M; Grimmond SM; Siebert R; Campo E; Shibata T; Pfister SM; Campbell PJ; Stratton MR Nature; 2013 Aug; 500(7463):415-21. PubMed ID: 23945592 [TBL] [Abstract][Full Text] [Related]
14. Analysis of 7,815 cancer exomes reveals associations between mutational processes and somatic driver mutations. Poulos RC; Wong YT; Ryan R; Pang H; Wong JWH PLoS Genet; 2018 Nov; 14(11):e1007779. PubMed ID: 30412573 [TBL] [Abstract][Full Text] [Related]
15. Pan-cancer association of DNA repair deficiencies with whole-genome mutational patterns. Sørensen SG; Shrikhande A; Poulsgaard GA; Christensen MH; Bertl J; Laursen BE; Hoffmann ER; Pedersen JS Elife; 2023 Mar; 12():. PubMed ID: 36883553 [TBL] [Abstract][Full Text] [Related]
16. Analysis of mutational signatures in C. elegans: Implications for cancer genome analysis. Meier B; Volkova NV; Gerstung M; Gartner A DNA Repair (Amst); 2020 Nov; 95():102957. PubMed ID: 32980770 [TBL] [Abstract][Full Text] [Related]
17. MutationalPatterns: the one stop shop for the analysis of mutational processes. Manders F; Brandsma AM; de Kanter J; Verheul M; Oka R; van Roosmalen MJ; van der Roest B; van Hoeck A; Cuppen E; van Boxtel R BMC Genomics; 2022 Feb; 23(1):134. PubMed ID: 35168570 [TBL] [Abstract][Full Text] [Related]
18. SigsPack, a package for cancer mutational signatures. Schumann F; Blanc E; Messerschmidt C; Blankenstein T; Busse A; Beule D BMC Bioinformatics; 2019 Sep; 20(1):450. PubMed ID: 31477009 [TBL] [Abstract][Full Text] [Related]
19. Flexible model-based non-negative matrix factorization with application to mutational signatures. Laursen R; Maretty L; Hobolth A Stat Appl Genet Mol Biol; 2024 Jan; 23(1):. PubMed ID: 38753402 [TBL] [Abstract][Full Text] [Related]
20. Somatic mutational signatures in polyposis and colorectal cancer. Grolleman JE; Díaz-Gay M; Franch-Expósito S; Castellví-Bel S; de Voer RM Mol Aspects Med; 2019 Oct; 69():62-72. PubMed ID: 31108140 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]