BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

190 related articles for article (PubMed ID: 37432499)

  • 1. MOViDA: multiomics visible drug activity prediction with a biologically informed neural network model.
    Ferraro L; Scala G; Cerulo L; Carosati E; Ceccarelli M
    Bioinformatics; 2023 Jul; 39(7):. PubMed ID: 37432499
    [TBL] [Abstract][Full Text] [Related]  

  • 2. COmic: convolutional kernel networks for interpretable end-to-end learning on (multi-)omics data.
    Ditz JC; Reuter B; Pfeifer N
    Bioinformatics; 2023 Jun; 39(39 Suppl 1):i76-i85. PubMed ID: 37387152
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MMCL-CDR: enhancing cancer drug response prediction with multi-omics and morphology images contrastive representation learning.
    Li Y; Guo Z; Gao X; Wang G
    Bioinformatics; 2023 Dec; 39(12):. PubMed ID: 38070154
    [TBL] [Abstract][Full Text] [Related]  

  • 4. RAMP: response-aware multi-task learning with contrastive regularization for cancer drug response prediction.
    Lee K; Cho D; Jang J; Choi K; Jeong HO; Seo J; Jeong WK; Lee S
    Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36460623
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pathformer: a biological pathway informed transformer for disease diagnosis and prognosis using multi-omics data.
    Liu X; Tao Y; Cai Z; Bao P; Ma H; Li K; Li M; Zhu Y; Lu ZJ
    Bioinformatics; 2024 May; 40(5):. PubMed ID: 38741230
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Predicting synergistic anticancer drug combination based on low-rank global attention mechanism and bilinear predictor.
    Gan Y; Huang X; Guo W; Yan C; Zou G
    Bioinformatics; 2023 Oct; 39(10):. PubMed ID: 37812255
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Pre-training graph neural networks for link prediction in biomedical networks.
    Long Y; Wu M; Liu Y; Fang Y; Kwoh CK; Chen J; Luo J; Li X
    Bioinformatics; 2022 Apr; 38(8):2254-2262. PubMed ID: 35171981
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interpretable meta-learning of multi-omics data for survival analysis and pathway enrichment.
    Cho HJ; Shu M; Bekiranov S; Zang C; Zhang A
    Bioinformatics; 2023 Apr; 39(4):. PubMed ID: 36864611
    [TBL] [Abstract][Full Text] [Related]  

  • 9. GraphDTA: predicting drug-target binding affinity with graph neural networks.
    Nguyen T; Le H; Quinn TP; Nguyen T; Le TD; Venkatesh S
    Bioinformatics; 2021 May; 37(8):1140-1147. PubMed ID: 33119053
    [TBL] [Abstract][Full Text] [Related]  

  • 10. DeepDDS: deep graph neural network with attention mechanism to predict synergistic drug combinations.
    Wang J; Liu X; Shen S; Deng L; Liu H
    Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34571537
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Interpreting biologically informed neural networks for enhanced proteomic biomarker discovery and pathway analysis.
    Hartman E; Scott AM; Karlsson C; Mohanty T; Vaara ST; Linder A; Malmström L; Malmström J
    Nat Commun; 2023 Sep; 14(1):5359. PubMed ID: 37660105
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SYNPRED: prediction of drug combination effects in cancer using different synergy metrics and ensemble learning.
    Preto AJ; Matos-Filipe P; Mourão J; Moreira IS
    Gigascience; 2022 Sep; 11():. PubMed ID: 36155782
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A spatial-temporal gated attention module for molecular property prediction based on molecular geometry.
    Li C; Wang J; Niu Z; Yao J; Zeng X
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33822856
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ReGeNNe: genetic pathway-based deep neural network using canonical correlation regularizer for disease prediction.
    Sharma D; Xu W
    Bioinformatics; 2023 Nov; 39(11):. PubMed ID: 37963055
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DTI-Voodoo: machine learning over interaction networks and ontology-based background knowledge predicts drug-target interactions.
    Hinnerichs T; Hoehndorf R
    Bioinformatics; 2021 Dec; 37(24):4835-4843. PubMed ID: 34320178
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Drug-Drug Interaction Predicting by Neural Network Using Integrated Similarity.
    Rohani N; Eslahchi C
    Sci Rep; 2019 Sep; 9(1):13645. PubMed ID: 31541145
    [TBL] [Abstract][Full Text] [Related]  

  • 17. XGraphBoost: Extracting Graph Neural Network-Based Features for a Better Prediction of Molecular Properties.
    Deng D; Chen X; Zhang R; Lei Z; Wang X; Zhou F
    J Chem Inf Model; 2021 Jun; 61(6):2697-2705. PubMed ID: 34009965
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Trader as a new optimization algorithm predicts drug-target interactions efficiently.
    Masoudi-Sobhanzadeh Y; Omidi Y; Amanlou M; Masoudi-Nejad A
    Sci Rep; 2019 Jun; 9(1):9348. PubMed ID: 31249365
    [TBL] [Abstract][Full Text] [Related]  

  • 19. BACPI: a bi-directional attention neural network for compound-protein interaction and binding affinity prediction.
    Li M; Lu Z; Wu Y; Li Y
    Bioinformatics; 2022 Mar; 38(7):1995-2002. PubMed ID: 35043942
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Optimizing neural networks for medical data sets: A case study on neonatal apnea prediction.
    Shirwaikar RD; Acharya U D; Makkithaya K; M S; Srivastava S; Lewis U LES
    Artif Intell Med; 2019 Jul; 98():59-76. PubMed ID: 31521253
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.