133 related articles for article (PubMed ID: 37433228)
21. Coarse-grained modeling of the intrinsically disordered protein Histatin 5 in solution: Monte Carlo simulations in combination with SAXS.
Cragnell C; Durand D; Cabane B; Skepö M
Proteins; 2016 Jun; 84(6):777-91. PubMed ID: 26914439
[TBL] [Abstract][Full Text] [Related]
22. Conformational ensembles of intrinsically disordered proteins and flexible multidomain proteins.
Thomasen FE; Lindorff-Larsen K
Biochem Soc Trans; 2022 Feb; 50(1):541-554. PubMed ID: 35129612
[TBL] [Abstract][Full Text] [Related]
23. Dynamical Oligomerisation of Histidine Rich Intrinsically Disordered ProteinS Is Regulated through Zinc-Histidine Interactions.
Cragnell C; Staby L; Lenton S; Kragelund BB; Skepö M
Biomolecules; 2019 Apr; 9(5):. PubMed ID: 31052346
[TBL] [Abstract][Full Text] [Related]
24. Structural Ensembles of Intrinsically Disordered Proteins Depend Strongly on Force Field: A Comparison to Experiment.
Rauscher S; Gapsys V; Gajda MJ; Zweckstetter M; de Groot BL; Grubmüller H
J Chem Theory Comput; 2015 Nov; 11(11):5513-24. PubMed ID: 26574339
[TBL] [Abstract][Full Text] [Related]
25. Artificial intelligence guided conformational mining of intrinsically disordered proteins.
Gupta A; Dey S; Hicks A; Zhou HX
Commun Biol; 2022 Jun; 5(1):610. PubMed ID: 35725761
[TBL] [Abstract][Full Text] [Related]
26. Temperature effects on the hydrodynamic radius of the intrinsically disordered N-terminal region of the p53 protein.
Langridge TD; Tarver MJ; Whitten ST
Proteins; 2014 Apr; 82(4):668-78. PubMed ID: 24150971
[TBL] [Abstract][Full Text] [Related]
27. Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.
Liu H; Song D; Zhang Y; Yang S; Luo R; Chen HF
Phys Chem Chem Phys; 2019 Oct; 21(39):21918-21931. PubMed ID: 31552948
[TBL] [Abstract][Full Text] [Related]
28. Improving Martini 3 for Disordered and Multidomain Proteins.
Thomasen FE; Pesce F; Roesgaard MA; Tesei G; Lindorff-Larsen K
J Chem Theory Comput; 2022 Apr; 18(4):2033-2041. PubMed ID: 35377637
[TBL] [Abstract][Full Text] [Related]
29. Exploring Curated Conformational Ensembles of Intrinsically Disordered Proteins in the Protein Ensemble Database.
Quaglia F; Lazar T; Hatos A; Tompa P; Piovesan D; Tosatto SCE
Curr Protoc; 2021 Jul; 1(7):e192. PubMed ID: 34252246
[TBL] [Abstract][Full Text] [Related]
30. Sequence Reversal Prevents Chain Collapse and Yields Heat-Sensitive Intrinsic Disorder.
English LR; Tischer A; Demeler AK; Demeler B; Whitten ST
Biophys J; 2018 Jul; 115(2):328-340. PubMed ID: 30021108
[TBL] [Abstract][Full Text] [Related]
31. Hierarchical Ensembles of Intrinsically Disordered Proteins at Atomic Resolution in Molecular Dynamics Simulations.
Pietrek LM; Stelzl LS; Hummer G
J Chem Theory Comput; 2020 Jan; 16(1):725-737. PubMed ID: 31809054
[TBL] [Abstract][Full Text] [Related]
32. Evaluating Models of Varying Complexity of Crowded Intrinsically Disordered Protein Solutions Against SAXS.
Fagerberg E; Lenton S; Skepö M
J Chem Theory Comput; 2019 Dec; 15(12):6968-6983. PubMed ID: 31714774
[TBL] [Abstract][Full Text] [Related]
33. Development of Charge-Augmented Three-Point Water Model (CAIPi3P) for Accurate Simulations of Intrinsically Disordered Proteins.
de Souza JV; Zariquiey FS; Bronowska AK
Int J Mol Sci; 2020 Aug; 21(17):. PubMed ID: 32859072
[TBL] [Abstract][Full Text] [Related]
34. Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation.
Shrestha UR; Juneja P; Zhang Q; Gurumoorthy V; Borreguero JM; Urban V; Cheng X; Pingali SV; Smith JC; O'Neill HM; Petridis L
Proc Natl Acad Sci U S A; 2019 Oct; 116(41):20446-20452. PubMed ID: 31548393
[TBL] [Abstract][Full Text] [Related]
35. Diversity of hydrodynamic radii of intrinsically disordered proteins.
Białobrzewski MK; Klepka BP; Michaś A; Cieplak-Rotowska MK; Staszałek Z; Niedźwiecka A
Eur Biophys J; 2023 Oct; 52(6-7):607-618. PubMed ID: 37831084
[TBL] [Abstract][Full Text] [Related]
36. Enhancing Conformational Sampling for Intrinsically Disordered and Ordered Proteins by Variational Autoencoder.
Zhu JJ; Zhang NJ; Wei T; Chen HF
Int J Mol Sci; 2023 Apr; 24(8):. PubMed ID: 37108059
[TBL] [Abstract][Full Text] [Related]
37. Refining conformational ensembles of flexible proteins against small-angle x-ray scattering data.
Pesce F; Lindorff-Larsen K
Biophys J; 2021 Nov; 120(22):5124-5135. PubMed ID: 34627764
[TBL] [Abstract][Full Text] [Related]
38. Obtaining Hydrodynamic Radii of Intrinsically Disordered Protein Ensembles by Pulsed Field Gradient NMR Measurements.
Leeb S; Danielsson J
Methods Mol Biol; 2020; 2141():285-302. PubMed ID: 32696363
[TBL] [Abstract][Full Text] [Related]
39. Predicting molecular properties of α-synuclein using force fields for intrinsically disordered proteins.
Pedersen KB; Flores-Canales JC; Schiøtt B
Proteins; 2023 Jan; 91(1):47-61. PubMed ID: 35950933
[TBL] [Abstract][Full Text] [Related]
40. Unusual compactness of a polyproline type II structure.
Zagrovic B; Lipfert J; Sorin EJ; Millett IS; van Gunsteren WF; Doniach S; Pande VS
Proc Natl Acad Sci U S A; 2005 Aug; 102(33):11698-703. PubMed ID: 16085707
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]