BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

213 related articles for article (PubMed ID: 37450153)

  • 1. Protein-Protein Interaction Network Mapping by Affinity Purification Cross-Linking Mass Spectrometry (AP-XL-MS) based Proteomics.
    Mehta A; Kamal AHM; Cornelius S; Chowdhury SM
    Methods Mol Biol; 2023; 2690():255-267. PubMed ID: 37450153
    [TBL] [Abstract][Full Text] [Related]  

  • 2. High Confidence Identification of Cross-Linked Peptides by an Enrichment-Based Dual Cleavable Cross-Linking Technology and Data Analysis tool Cleave-XL.
    Chakrabarty JK; Sadananda SC; Bhat A; Naik AJ; Ostwal DV; Chowdhury SM
    J Am Soc Mass Spectrom; 2020 Feb; 31(2):173-182. PubMed ID: 32031390
    [TBL] [Abstract][Full Text] [Related]  

  • 3. In vivo cross-linking-based affinity purification and mass spectrometry for targeting intracellular protein-protein interactions.
    Zhong B; An Y; Gao H; Zhao L; Li X; Liang Z; Zhang Y; Zhao Q; Zhang L
    Anal Chim Acta; 2023 Jul; 1265():341273. PubMed ID: 37230567
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A cross-linking/mass spectrometry workflow based on MS-cleavable cross-linkers and the MeroX software for studying protein structures and protein-protein interactions.
    Iacobucci C; Götze M; Ihling CH; Piotrowski C; Arlt C; Schäfer M; Hage C; Schmidt R; Sinz A
    Nat Protoc; 2018 Dec; 13(12):2864-2889. PubMed ID: 30382245
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Efficient and robust proteome-wide approaches for cross-linking mass spectrometry.
    Klykov O; Steigenberger B; Pektaş S; Fasci D; Heck AJR; Scheltema RA
    Nat Protoc; 2018 Dec; 13(12):2964-2990. PubMed ID: 30446747
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Optimized Cross-Linking Mass Spectrometry for in Situ Interaction Proteomics.
    Ser Z; Cifani P; Kentsis A
    J Proteome Res; 2019 Jun; 18(6):2545-2558. PubMed ID: 31083951
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ECL 3.0: a sensitive peptide identification tool for cross-linking mass spectrometry data analysis.
    Zhou C; Dai S; Lai S; Lin Y; Zhang X; Li N; Yu W
    BMC Bioinformatics; 2023 Sep; 24(1):351. PubMed ID: 37730532
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Divide and conquer: cleavable cross-linkers to study protein conformation and protein-protein interactions.
    Sinz A
    Anal Bioanal Chem; 2017 Jan; 409(1):33-44. PubMed ID: 27734140
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein interaction landscapes revealed by advanced in vivo cross-linking-mass spectrometry.
    Wheat A; Yu C; Wang X; Burke AM; Chemmama IE; Kaake RM; Baker P; Rychnovsky SD; Yang J; Huang L
    Proc Natl Acad Sci U S A; 2021 Aug; 118(32):. PubMed ID: 34349018
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cross-linking Mass Spectrometry Analysis of the Yeast Nucleus Reveals Extensive Protein-Protein Interactions Not Detected by Systematic Two-Hybrid or Affinity Purification-Mass Spectrometry.
    Bartolec TK; Smith DL; Pang CNI; Xu YD; Hamey JJ; Wilkins MR
    Anal Chem; 2020 Jan; 92(2):1874-1882. PubMed ID: 31851481
    [No Abstract]   [Full Text] [Related]  

  • 11. Identification and Quantification of Affinity-Purified Proteins with MaxQuant, Followed by the Discrimination of Nonspecific Interactions with the CRAPome Interface.
    Lee PY; Low TY
    Methods Mol Biol; 2023; 2690():299-310. PubMed ID: 37450156
    [TBL] [Abstract][Full Text] [Related]  

  • 12. XL-MS: Protein cross-linking coupled with mass spectrometry.
    Holding AN
    Methods; 2015 Nov; 89():54-63. PubMed ID: 26079926
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Development of a Novel Sulfoxide-Containing MS-Cleavable Homobifunctional Cysteine-Reactive Cross-Linker for Studying Protein-Protein Interactions.
    Gutierrez CB; Block SA; Yu C; Soohoo SM; Huszagh AS; Rychnovsky SD; Huang L
    Anal Chem; 2018 Jun; 90(12):7600-7607. PubMed ID: 29792801
    [TBL] [Abstract][Full Text] [Related]  

  • 14. In Vivo Cross-Linking to Analyze Transient Protein-Protein Interactions.
    Pertl-Obermeyer H; Obermeyer G
    Methods Mol Biol; 2020; 2139():273-287. PubMed ID: 32462593
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Analysis of protein structure by cross-linking combined with mass spectrometry.
    Petrotchenko EV; Makepeace KA; Serpa JJ; Borchers CH
    Methods Mol Biol; 2014; 1156():447-63. PubMed ID: 24792007
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cross-linking/mass spectrometry at the crossroads.
    Piersimoni L; Sinz A
    Anal Bioanal Chem; 2020 Sep; 412(24):5981-5987. PubMed ID: 32472143
    [TBL] [Abstract][Full Text] [Related]  

  • 17. eXL-MS: An Enhanced Cross-Linking Mass Spectrometry Workflow To Study Protein Complexes.
    Rey M; Dupré M; Lopez-Neira I; Duchateau M; Chamot-Rooke J
    Anal Chem; 2018 Sep; 90(18):10707-10714. PubMed ID: 30125099
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Systems structural biology measurements by in vivo cross-linking with mass spectrometry.
    Chavez JD; Mohr JP; Mathay M; Zhong X; Keller A; Bruce JE
    Nat Protoc; 2019 Aug; 14(8):2318-2343. PubMed ID: 31270507
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network.
    Guerrero C; Tagwerker C; Kaiser P; Huang L
    Mol Cell Proteomics; 2006 Feb; 5(2):366-78. PubMed ID: 16284124
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genetically encoded cleavable protein photo-cross-linker.
    Lin S; He D; Long T; Zhang S; Meng R; Chen PR
    J Am Chem Soc; 2014 Aug; 136(34):11860-3. PubMed ID: 25084056
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.