These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
26. Automated method for the rapid and precise estimation of adherent cell culture characteristics from phase contrast microscopy images. Jaccard N; Griffin LD; Keser A; Macown RJ; Super A; Veraitch FS; Szita N Biotechnol Bioeng; 2014 Mar; 111(3):504-17. PubMed ID: 24037521 [TBL] [Abstract][Full Text] [Related]
27. Using ImageJ (Fiji) to Analyze and Present X-Ray CT Images of Enamel. Brookes SJ Methods Mol Biol; 2019; 1922():267-291. PubMed ID: 30838584 [TBL] [Abstract][Full Text] [Related]
28. Overview of image analysis, image importing, and image processing using freeware. Bearer EL Curr Protoc Mol Biol; 2003 Aug; Chapter 14():Unit 14.15. PubMed ID: 18265322 [TBL] [Abstract][Full Text] [Related]
29. Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Arganda-Carreras I; Kaynig V; Rueden C; Eliceiri KW; Schindelin J; Cardona A; Sebastian Seung H Bioinformatics; 2017 Aug; 33(15):2424-2426. PubMed ID: 28369169 [TBL] [Abstract][Full Text] [Related]
30. Effective image visualization for publications - a workflow using open access tools and concepts. Schmied C; Jambor HK F1000Res; 2020; 9():1373. PubMed ID: 33708381 [TBL] [Abstract][Full Text] [Related]
31. Dot Scanner: open-source software for quantitative live-cell imaging in planta. Allen H; Davis B; Patel J; Gu Y Plant J; 2024 Jun; 118(5):1689-1698. PubMed ID: 38310596 [TBL] [Abstract][Full Text] [Related]
32. Live Imaging and Quantification of Neutrophil Extracellular Trap Formation. Silva LM; Moutsopoulos N; Bugge TH; Doyle A Curr Protoc; 2021 Jul; 1(7):e157. PubMed ID: 34260822 [TBL] [Abstract][Full Text] [Related]
33. How to Build an Image-Processing Pipeline for Automating Multiparameter Histocytometry Analysis. Munoz-Erazo L; Schmidt AJ; Shinko D; Price KM Curr Protoc; 2022 Mar; 2(3):e380. PubMed ID: 35294109 [TBL] [Abstract][Full Text] [Related]
34. Streamlined particle quantification (SParQ) plug-in is an automated fluorescent vesicle quantification plug-in for particle quantification in Fiji/ImageJ. Mesquita A; Pereira J; Jenny A Autophagy; 2020 Sep; 16(9):1711-1717. PubMed ID: 31752589 [TBL] [Abstract][Full Text] [Related]
35. SMLocalizer, a GPU accelerated ImageJ plugin for single molecule localization microscopy. Bernhem K; Brismar H Bioinformatics; 2018 Jan; 34(1):137-138. PubMed ID: 28968783 [TBL] [Abstract][Full Text] [Related]
36. Glia Cell Morphology Analysis Using the Fiji GliaMorph Toolkit. Kugler E; Breitenbach EM; MacDonald R Curr Protoc; 2023 Jan; 3(1):e654. PubMed ID: 36688682 [TBL] [Abstract][Full Text] [Related]
37. Quantitative analysis of subcellular distributions with an open-source, object-based tool. Ryder PV; Lerit DA Biol Open; 2020 Oct; 9(10):. PubMed ID: 32973081 [TBL] [Abstract][Full Text] [Related]
38. Visualization and co-registration of correlative microscopy data with the ImageJ plug-in Correlia. Schmidt M; Rohde F; Braumann UD Methods Cell Biol; 2021; 162():353-388. PubMed ID: 33707019 [TBL] [Abstract][Full Text] [Related]
39. Automated Macro Approach to Quantify Synapse Density in 2D Confocal Images from Fixed Immunolabeled Neural Tissue Sections. Rebollo E; Boix-Fabrés J; Arbones ML Methods Mol Biol; 2019; 2040():71-97. PubMed ID: 31432476 [TBL] [Abstract][Full Text] [Related]
40. nPAsym: an open-source plugin for ImageJ to quantify nuclear shape asymmetry. Bozhok YM; Golovko O; Nikonenko AG Comput Methods Programs Biomed; 2020 Nov; 196():105562. PubMed ID: 32544781 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]