These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

163 related articles for article (PubMed ID: 37527015)

  • 1. MIX-TPI: a flexible prediction framework for TCR-pMHC interactions based on multimodal representations.
    Yang M; Huang ZA; Zhou W; Ji J; Zhang J; He S; Zhu Z
    Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37527015
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MPID-T: database for sequence-structure-function information on T-cell receptor/peptide/MHC interactions.
    Tong JC; Kong L; Tan TW; Ranganathan S
    Appl Bioinformatics; 2006; 5(2):111-4. PubMed ID: 16722775
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A structural-based machine learning method to classify binding affinities between TCR and peptide-MHC complexes.
    Dhusia K; Su Z; Wu Y
    Mol Immunol; 2021 Nov; 139():76-86. PubMed ID: 34455212
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Performance comparison of TCR-pMHC prediction tools reveals a strong data dependency.
    Deng L; Ly C; Abdollahi S; Zhao Y; Prinz I; Bonn S
    Front Immunol; 2023; 14():1128326. PubMed ID: 37143667
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A framework for highly multiplexed dextramer mapping and prediction of T cell receptor sequences to antigen specificity.
    Zhang W; Hawkins PG; He J; Gupta NT; Liu J; Choonoo G; Jeong SW; Chen CR; Dhanik A; Dillon M; Deering R; Macdonald LE; Thurston G; Atwal GS
    Sci Adv; 2021 May; 7(20):. PubMed ID: 33990328
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Antibody specific for the peptide.major histocompatibility complex. Is it T cell receptor-like?
    Mareeva T; Lebedeva T; Anikeeva N; Manser T; Sykulev Y
    J Biol Chem; 2004 Oct; 279(43):44243-9. PubMed ID: 15302863
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NetTCR-2.1: Lessons and guidance on how to develop models for TCR specificity predictions.
    Montemurro A; Jessen LE; Nielsen M
    Front Immunol; 2022; 13():1055151. PubMed ID: 36561755
    [TBL] [Abstract][Full Text] [Related]  

  • 8. T-cell receptor (TCR)-peptide specificity overrides affinity-enhancing TCR-major histocompatibility complex interactions.
    Cole DK; Miles KM; Madura F; Holland CJ; Schauenburg AJ; Godkin AJ; Bulek AM; Fuller A; Akpovwa HJ; Pymm PG; Liddy N; Sami M; Li Y; Rizkallah PJ; Jakobsen BK; Sewell AK
    J Biol Chem; 2014 Jan; 289(2):628-38. PubMed ID: 24196962
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genome-wide structural modelling of TCR-pMHC interactions.
    Liu IH; Lo YS; Yang JM
    BMC Genomics; 2013; 14 Suppl 5(Suppl 5):S5. PubMed ID: 24564684
    [TBL] [Abstract][Full Text] [Related]  

  • 10. DLpTCR: an ensemble deep learning framework for predicting immunogenic peptide recognized by T cell receptor.
    Xu Z; Luo M; Lin W; Xue G; Wang P; Jin X; Xu C; Zhou W; Cai Y; Yang W; Nie H; Jiang Q
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34415016
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PAComplex: a web server to infer peptide antigen families and binding models from TCR-pMHC complexes.
    Liu IH; Lo YS; Yang JM
    Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W254-60. PubMed ID: 21666259
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Attentive Variational Information Bottleneck for TCR-peptide interaction prediction.
    Grazioli F; Machart P; Mösch A; Li K; Castorina LV; Pfeifer N; Min MR
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36571499
    [TBL] [Abstract][Full Text] [Related]  

  • 13. TSpred: a robust prediction framework for TCR-epitope interactions using paired chain TCR sequence data.
    Kim HY; Kim S; Park WY; Kim D
    Bioinformatics; 2024 Aug; 40(8):. PubMed ID: 39052940
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Probing the Conformational Dynamics of Affinity-Enhanced T Cell Receptor Variants upon Binding the Peptide-Bound Major Histocompatibility Complex by Hydrogen/Deuterium Exchange Mass Spectrometry.
    Merkle PS; Trabjerg E; Hongjian S; Ferber M; Cuendet MA; Jørgensen TJD; Luescher I; Irving M; Zoete V; Michielin O; Rand KD
    Biochemistry; 2021 Mar; 60(11):859-872. PubMed ID: 33689297
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Quantitative approaches for decoding the specificity of the human T cell repertoire.
    Ghoreyshi ZS; George JT
    Front Immunol; 2023; 14():1228873. PubMed ID: 37781387
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Engineering improved T cell receptors using an alanine-scan guided T cell display selection system.
    Malecek K; Zhong S; McGary K; Yu C; Huang K; Johnson LA; Rosenberg SA; Krogsgaard M
    J Immunol Methods; 2013 Jun; 392(1-2):1-11. PubMed ID: 23500145
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Covalent TCR-peptide-MHC interactions induce T cell activation and redirect T cell fate in the thymus.
    Szeto C; Zareie P; Wirasinha RC; Zhang JB; Nguyen AT; Riboldi-Tunnicliffe A; La Gruta NL; Gras S; Daley SR
    Nat Commun; 2022 Aug; 13(1):4951. PubMed ID: 35999236
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting TCR sequences for unseen antigen epitopes using structural and sequence features.
    Ji H; Wang XX; Zhang Q; Zhang C; Zhang HM
    Brief Bioinform; 2024 Mar; 25(3):. PubMed ID: 38711371
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Characterizing the functionality of recombinant T-cell receptors in vitro: a pMHC tetramer based approach.
    Tissot AC; Pecorari F; Plückthun A
    J Immunol Methods; 2000 Mar; 236(1-2):147-65. PubMed ID: 10699587
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Information-Driven Docking for TCR-pMHC Complex Prediction.
    Peacock T; Chain B
    Front Immunol; 2021; 12():686127. PubMed ID: 34177934
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.