These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 37528412)

  • 1. VariantscanR: an R-package as a clinical tool for variant filtering of known phenotype-associated variants in domestic animals.
    Boeykens F; Bhatti SFM; Peelman L; Broeckx BJG
    BMC Bioinformatics; 2023 Aug; 24(1):305. PubMed ID: 37528412
    [TBL] [Abstract][Full Text] [Related]  

  • 2. 123VCF: an intuitive and efficient tool for filtering VCF files.
    Eidi M; Abdolalizadeh S; Moeini S; Garshasbi M; Zahiri J
    BMC Bioinformatics; 2024 Feb; 25(1):68. PubMed ID: 38350858
    [TBL] [Abstract][Full Text] [Related]  

  • 3. VCF-Server: A web-based visualization tool for high-throughput variant data mining and management.
    Jiang J; Gu J; Zhao T; Lu H
    Mol Genet Genomic Med; 2019 Jul; 7(7):e00641. PubMed ID: 31127704
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An heuristic filtering tool to identify phenotype-associated genetic variants applied to human intellectual disability and canine coat colors.
    Broeckx BJ; Coopman F; Verhoeven G; Bosmans T; Gielen I; Dingemanse W; Saunders JH; Deforce D; Van Nieuwerburgh F
    BMC Bioinformatics; 2015 Nov; 16():391. PubMed ID: 26597515
    [TBL] [Abstract][Full Text] [Related]  

  • 5. WEP: a high-performance analysis pipeline for whole-exome data.
    D'Antonio M; D'Onorio De Meo P; Paoletti D; Elmi B; Pallocca M; Sanna N; Picardi E; Pesole G; Castrignanò T
    BMC Bioinformatics; 2013; 14 Suppl 7(Suppl 7):S11. PubMed ID: 23815231
    [TBL] [Abstract][Full Text] [Related]  

  • 6. VCF.Filter: interactive prioritization of disease-linked genetic variants from sequencing data.
    Müller H; Jimenez-Heredia R; Krolo A; Hirschmugl T; Dmytrus J; Boztug K; Bock C
    Nucleic Acids Res; 2017 Jul; 45(W1):W567-W572. PubMed ID: 28520890
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome analysis and knowledge-driven variant interpretation with TGex.
    Dahary D; Golan Y; Mazor Y; Zelig O; Barshir R; Twik M; Iny Stein T; Rosner G; Kariv R; Chen F; Zhang Q; Shen Y; Safran M; Lancet D; Fishilevich S
    BMC Med Genomics; 2019 Dec; 12(1):200. PubMed ID: 31888639
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SeqArray-a storage-efficient high-performance data format for WGS variant calls.
    Zheng X; Gogarten SM; Lawrence M; Stilp A; Conomos MP; Weir BS; Laurie C; Levine D
    Bioinformatics; 2017 Aug; 33(15):2251-2257. PubMed ID: 28334390
    [TBL] [Abstract][Full Text] [Related]  

  • 9. VEF: a variant filtering tool based on ensemble methods.
    Zhang C; Ochoa I
    Bioinformatics; 2020 Apr; 36(8):2328-2336. PubMed ID: 31873730
    [TBL] [Abstract][Full Text] [Related]  

  • 10. JWES: a new pipeline for whole genome/exome sequence data processing, management, and gene-variant discovery, annotation, prediction, and genotyping.
    Ahmed Z; Renart EG; Mishra D; Zeeshan S
    FEBS Open Bio; 2021 Sep; 11(9):2441-2452. PubMed ID: 34370400
    [TBL] [Abstract][Full Text] [Related]  

  • 11. VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files.
    Hart SN; Duffy P; Quest DJ; Hossain A; Meiners MA; Kocher JP
    Brief Bioinform; 2016 Mar; 17(2):346-51. PubMed ID: 26210358
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Whole-genome sequencing offers additional but limited clinical utility compared with reanalysis of whole-exome sequencing.
    Alfares A; Aloraini T; Subaie LA; Alissa A; Qudsi AA; Alahmad A; Mutairi FA; Alswaid A; Alothaim A; Eyaid W; Albalwi M; Alturki S; Alfadhel M
    Genet Med; 2018 Nov; 20(11):1328-1333. PubMed ID: 29565419
    [TBL] [Abstract][Full Text] [Related]  

  • 13. FMFilter: A fast model based variant filtering tool.
    Akgün M; Faruk Gerdan Ö; Görmez Z; Demirci H
    J Biomed Inform; 2016 Apr; 60():319-27. PubMed ID: 26925517
    [TBL] [Abstract][Full Text] [Related]  

  • 14. EVA: Exome Variation Analyzer, an efficient and versatile tool for filtering strategies in medical genomics.
    Coutant S; Cabot C; Lefebvre A; Léonard M; Prieur-Gaston E; Campion D; Lecroq T; Dauchel H
    BMC Bioinformatics; 2012; 13 Suppl 14(Suppl 14):S9. PubMed ID: 23095660
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Var∣Decrypt: a novel and user-friendly tool to explore and prioritize variants in whole-exome sequencing data.
    Salma M; Alaterre E; Moreaux J; Soler E
    Epigenetics Chromatin; 2023 Jun; 16(1):23. PubMed ID: 37312221
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Sarek: A portable workflow for whole-genome sequencing analysis of germline and somatic variants.
    Garcia M; Juhos S; Larsson M; Olason PI; Martin M; Eisfeldt J; DiLorenzo S; Sandgren J; Díaz De Ståhl T; Ewels P; Wirta V; Nistér M; Käller M; Nystedt B
    F1000Res; 2020; 9():63. PubMed ID: 32269765
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files.
    Ebbert MT; Wadsworth ME; Boehme KL; Hoyt KL; Sharp AR; O'Fallon BD; Kauwe JS; Ridge PG
    BMC Bioinformatics; 2014; 15 Suppl 7(Suppl 7):S12. PubMed ID: 25080132
    [TBL] [Abstract][Full Text] [Related]  

  • 18. DaMold: A data-mining platform for variant annotation and visualization in molecular diagnostics research.
    Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
    Hum Mutat; 2017 Jul; 38(7):778-787. PubMed ID: 28397319
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Diagnosis of a Single-Nucleotide Variant in Whole-Exome Sequencing Data for Patients With Inherited Diseases: Machine Learning Study Using Artificial Intelligence Variant Prioritization.
    Huang YS; Hsu C; Chune YC; Liao IC; Wang H; Lin YL; Hwu WL; Lee NC; Lai F
    JMIR Bioinform Biotechnol; 2022 Sep; 3(1):e37701. PubMed ID: 38935959
    [TBL] [Abstract][Full Text] [Related]  

  • 20. BrowseVCF: a web-based application and workflow to quickly prioritize disease-causative variants in VCF files.
    Salatino S; Ramraj V
    Brief Bioinform; 2017 Sep; 18(5):774-779. PubMed ID: 27373737
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.