148 related articles for article (PubMed ID: 37529166)
21. Ion Torrent ™ Genexus ™ Integrated Sequencer and ForeNGS Analysis Software-An automatic NGS-STR workflow from DNA to profile for forensic science.
Guo F; Lang Y; Long G; Liu Z; Jing G; Zhou Y; Zhang B; Yu S
Forensic Sci Int Genet; 2022 Nov; 61():102753. PubMed ID: 35931007
[TBL] [Abstract][Full Text] [Related]
22. Introduction of the Python script STRinNGS for analysis of STR regions in FASTQ or BAM files and expansion of the Danish STR sequence database to 11 STRs.
Friis SL; Buchard A; Rockenbauer E; Børsting C; Morling N
Forensic Sci Int Genet; 2016 Mar; 21():68-75. PubMed ID: 26722765
[TBL] [Abstract][Full Text] [Related]
23. Improved Assembly of Metagenome-Assembled Genomes and Viruses in Tibetan Saline Lake Sediment by HiFi Metagenomic Sequencing.
Tao Y; Xun F; Zhao C; Mao Z; Li B; Xing P; Wu QL
Microbiol Spectr; 2023 Feb; 11(1):e0332822. PubMed ID: 36475839
[TBL] [Abstract][Full Text] [Related]
24. Fast and SNP-aware short read alignment with SALT.
Quan W; Liu B; Wang Y
BMC Bioinformatics; 2021 Aug; 22(Suppl 9):172. PubMed ID: 34433415
[TBL] [Abstract][Full Text] [Related]
25. An enrichment method for mapping ambiguous reads to the reference genome for NGS analysis.
Liu Y; Ma Y; Salsman E; Manthey FA; Elias EM; Li X; Yan C
J Bioinform Comput Biol; 2019 Dec; 17(6):1940012. PubMed ID: 32019414
[TBL] [Abstract][Full Text] [Related]
26. New developments of alignment-free sequence comparison: measures, statistics and next-generation sequencing.
Song K; Ren J; Reinert G; Deng M; Waterman MS; Sun F
Brief Bioinform; 2014 May; 15(3):343-53. PubMed ID: 24064230
[TBL] [Abstract][Full Text] [Related]
27. A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis.
Akogwu I; Wang N; Zhang C; Gong P
Hum Genomics; 2016 Jul; 10 Suppl 2(Suppl 2):20. PubMed ID: 27461106
[TBL] [Abstract][Full Text] [Related]
28. VGEA: an RNA viral assembly toolkit.
Oluniyi PE; Ajogbasile F; Oguzie J; Uwanibe J; Kayode A; Happi A; Ugwu A; Olumade T; Ogunsanya O; Eromon PE; Folarin O; Frost SDW; Heeney J; Happi CT
PeerJ; 2021; 9():e12129. PubMed ID: 34567846
[TBL] [Abstract][Full Text] [Related]
29. Assembly-free genome comparison based on next-generation sequencing reads and variable length patterns.
Comin M; Schimd M
BMC Bioinformatics; 2014; 15 Suppl 9(Suppl 9):S1. PubMed ID: 25252700
[TBL] [Abstract][Full Text] [Related]
30. Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.
Goldstein S; Beka L; Graf J; Klassen JL
BMC Genomics; 2019 Jan; 20(1):23. PubMed ID: 30626323
[TBL] [Abstract][Full Text] [Related]
31. DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data.
Nagasaki H; Mochizuki T; Kodama Y; Saruhashi S; Morizaki S; Sugawara H; Ohyanagi H; Kurata N; Okubo K; Takagi T; Kaminuma E; Nakamura Y
DNA Res; 2013 Aug; 20(4):383-90. PubMed ID: 23657089
[TBL] [Abstract][Full Text] [Related]
32. CoverView: a sequence quality evaluation tool for next generation sequencing data.
Münz M; Mahamdallie S; Yost S; Rimmer A; Poyastro-Pearson E; Strydom A; Seal S; Ruark E; Rahman N
Wellcome Open Res; 2018; 3():36. PubMed ID: 29881786
[TBL] [Abstract][Full Text] [Related]
33. Alignment-free sequence comparison based on next-generation sequencing reads.
Song K; Ren J; Zhai Z; Liu X; Deng M; Sun F
J Comput Biol; 2013 Feb; 20(2):64-79. PubMed ID: 23383994
[TBL] [Abstract][Full Text] [Related]
34. An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome.
Ribeiro A; Golicz A; Hackett CA; Milne I; Stephen G; Marshall D; Flavell AJ; Bayer M
BMC Bioinformatics; 2015 Nov; 16():382. PubMed ID: 26558718
[TBL] [Abstract][Full Text] [Related]
35. PaSS: a sequencing simulator for PacBio sequencing.
Zhang W; Jia B; Wei C
BMC Bioinformatics; 2019 Jun; 20(1):352. PubMed ID: 31226925
[TBL] [Abstract][Full Text] [Related]
36. Next-generation sequencing techniques for eukaryotic microorganisms: sequencing-based solutions to biological problems.
Nowrousian M
Eukaryot Cell; 2010 Sep; 9(9):1300-10. PubMed ID: 20601439
[TBL] [Abstract][Full Text] [Related]
37. Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data.
Cole C; Krampis K; Karagiannis K; Almeida JS; Faison WJ; Motwani M; Wan Q; Golikov A; Pan Y; Simonyan V; Mazumder R
BMC Bioinformatics; 2014 Jan; 15():28. PubMed ID: 24467687
[TBL] [Abstract][Full Text] [Related]
38. Software for pre-processing Illumina next-generation sequencing short read sequences.
Chen C; Khaleel SS; Huang H; Wu CH
Source Code Biol Med; 2014; 9():8. PubMed ID: 24955109
[TBL] [Abstract][Full Text] [Related]
39. Read-mapping using personalized diploid reference genome for RNA sequencing data reduced bias for detecting allele-specific expression.
Yuan S; Qin Z
IEEE Int Conf Bioinform Biomed Workshops; 2012 Oct; 2012():718-724. PubMed ID: 25621316
[TBL] [Abstract][Full Text] [Related]
40. ART: a next-generation sequencing read simulator.
Huang W; Li L; Myers JR; Marth GT
Bioinformatics; 2012 Feb; 28(4):593-4. PubMed ID: 22199392
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]