These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
6. The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development. Fisher ME; Segerdell E; Matentzoglu N; Nenni MJ; Fortriede JD; Chu S; Pells TJ; Osumi-Sutherland D; Chaturvedi P; James-Zorn C; Sundararaj N; Lotay VS; Ponferrada V; Wang DZ; Kim E; Agalakov S; Arshinoff BI; Karimi K; Vize PD; Zorn AM BMC Bioinformatics; 2022 Mar; 23(1):99. PubMed ID: 35317743 [TBL] [Abstract][Full Text] [Related]
7. The anatomy of phenotype ontologies: principles, properties and applications. Gkoutos GV; Schofield PN; Hoehndorf R Brief Bioinform; 2018 Sep; 19(5):1008-1021. PubMed ID: 28387809 [TBL] [Abstract][Full Text] [Related]
8. Correlations Between Phenotypes and Biological Process Ontologies in Monogenic Human Diseases. Zhang C; Genchev GZ; Bergau D; Lu H Interdiscip Sci; 2020 Dec; 12(4):547-554. PubMed ID: 33113078 [TBL] [Abstract][Full Text] [Related]
9. Contribution of model organism phenotypes to the computational identification of human disease genes. Alghamdi SM; Schofield PN; Hoehndorf R Dis Model Mech; 2022 Jul; 15(7):. PubMed ID: 35758016 [TBL] [Abstract][Full Text] [Related]
11. The Ontology of Biological Attributes (OBA)-computational traits for the life sciences. Stefancsik R; Balhoff JP; Balk MA; Ball RL; Bello SM; Caron AR; Chesler EJ; de Souza V; Gehrke S; Haendel M; Harris LW; Harris NL; Ibrahim A; Koehler S; Matentzoglu N; McMurry JA; Mungall CJ; Munoz-Torres MC; Putman T; Robinson P; Smedley D; Sollis E; Thessen AE; Vasilevsky N; Walton DO; Osumi-Sutherland D Mamm Genome; 2023 Sep; 34(3):364-378. PubMed ID: 37076585 [TBL] [Abstract][Full Text] [Related]
12. mOWL: Python library for machine learning with biomedical ontologies. Zhapa-Camacho F; Kulmanov M; Hoehndorf R Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36534832 [TBL] [Abstract][Full Text] [Related]
13. Automated ontology generation framework powered by linked biomedical ontologies for disease-drug domain. Alobaidi M; Malik KM; Hussain M Comput Methods Programs Biomed; 2018 Oct; 165():117-128. PubMed ID: 30337066 [TBL] [Abstract][Full Text] [Related]
14. Integrating ontologies of human diseases, phenotypes, and radiological diagnosis. Finke MT; Filice RW; Kahn CE J Am Med Inform Assoc; 2019 Feb; 26(2):149-154. PubMed ID: 30624645 [TBL] [Abstract][Full Text] [Related]
15. BO-LSTM: classifying relations via long short-term memory networks along biomedical ontologies. Lamurias A; Sousa D; Clarke LA; Couto FM BMC Bioinformatics; 2019 Jan; 20(1):10. PubMed ID: 30616557 [TBL] [Abstract][Full Text] [Related]
16. Toward a systematic conflict resolution framework for ontologies. Keet CM; Grütter R J Biomed Semantics; 2021 Aug; 12(1):15. PubMed ID: 34372934 [TBL] [Abstract][Full Text] [Related]
17. HPO2Vec+: Leveraging heterogeneous knowledge resources to enrich node embeddings for the Human Phenotype Ontology. Shen F; Peng S; Fan Y; Wen A; Liu S; Wang Y; Wang L; Liu H J Biomed Inform; 2019 Aug; 96():103246. PubMed ID: 31255713 [TBL] [Abstract][Full Text] [Related]