134 related articles for article (PubMed ID: 37565789)
1. DYW cytidine deaminase domains have a long-range impact on RNA recognition by the PPR array of chimeric plant C-to-U RNA editing factors and strongly affect target selection.
Yang Y; Oldenkott B; Ramanathan S; Lesch E; Takenaka M; Schallenberg-Rüdinger M; Knoop V
Plant J; 2023 Nov; 116(3):840-854. PubMed ID: 37565789
[TBL] [Abstract][Full Text] [Related]
2. A plant pentatricopeptide repeat protein with a DYW-deaminase domain is sufficient for catalyzing C-to-U RNA editing
Hayes ML; Santibanez PI
J Biol Chem; 2020 Mar; 295(11):3497-3505. PubMed ID: 31996373
[TBL] [Abstract][Full Text] [Related]
3. Cytidine deaminase motifs within the DYW domain of two pentatricopeptide repeat-containing proteins are required for site-specific chloroplast RNA editing.
Wagoner JA; Sun T; Lin L; Hanson MR
J Biol Chem; 2015 Jan; 290(5):2957-68. PubMed ID: 25512379
[TBL] [Abstract][Full Text] [Related]
4. A DYW-protein knockout in Physcomitrella affects two closely spaced mitochondrial editing sites and causes a severe developmental phenotype.
Schallenberg-Rüdinger M; Kindgren P; Zehrmann A; Small I; Knoop V
Plant J; 2013 Nov; 76(3):420-32. PubMed ID: 23909746
[TBL] [Abstract][Full Text] [Related]
5. DYW deaminase domain has a distinct preference for neighboring nucleotides of the target RNA editing sites.
Maeda A; Takenaka S; Wang T; Frink B; Shikanai T; Takenaka M
Plant J; 2022 Aug; 111(3):756-767. PubMed ID: 35652245
[TBL] [Abstract][Full Text] [Related]
6. Beyond a PPR-RNA recognition code: Many aspects matter for the multi-targeting properties of RNA editing factor PPR56.
Yang Y; Ritzenhofen K; Otrzonsek J; Xie J; Schallenberg-Rüdinger M; Knoop V
PLoS Genet; 2023 Aug; 19(8):e1010733. PubMed ID: 37603555
[TBL] [Abstract][Full Text] [Related]
7. Conservation of the moss RNA editing factor PPR78 despite the loss of its known cytidine-to-uridine editing sites is explained by a hidden extra target.
Lesch E; Stempel MS; Dressnandt V; Oldenkott B; Knoop V; Schallenberg-Rüdinger M
Plant Cell; 2024 Feb; 36(3):727-745. PubMed ID: 38000897
[TBL] [Abstract][Full Text] [Related]
8. A conserved glutamate residue in the C-terminal deaminase domain of pentatricopeptide repeat proteins is required for RNA editing activity.
Hayes ML; Dang KN; Diaz MF; Mulligan RM
J Biol Chem; 2015 Apr; 290(16):10136-42. PubMed ID: 25739442
[TBL] [Abstract][Full Text] [Related]
9. The DYW Domains of Pentatricopeptide Repeat RNA Editing Factors Contribute to Discriminate Target and Non-Target Editing Sites.
Ichinose M; Sugita M
Plant Cell Physiol; 2018 Aug; 59(8):1652-1659. PubMed ID: 29718364
[TBL] [Abstract][Full Text] [Related]
10. A Single-Target Mitochondrial RNA Editing Factor of Funaria hygrometrica Can Fully Reconstitute RNA Editing at Two Sites in Physcomitrella patens.
Schallenberg-Rüdinger M; Oldenkott B; Hiss M; Trinh PL; Knoop V; Rensing SA
Plant Cell Physiol; 2017 Mar; 58(3):496-507. PubMed ID: 28394399
[TBL] [Abstract][Full Text] [Related]
11. Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains.
Hayes ML; Giang K; Berhane B; Mulligan RM
J Biol Chem; 2013 Dec; 288(51):36519-29. PubMed ID: 24194514
[TBL] [Abstract][Full Text] [Related]
12. Plant-type pentatricopeptide repeat proteins with a DYW domain drive C-to-U RNA editing in
Oldenkott B; Yang Y; Lesch E; Knoop V; Schallenberg-Rüdinger M
Commun Biol; 2019; 2():85. PubMed ID: 30854477
[TBL] [Abstract][Full Text] [Related]
13. A survey of PPR proteins identifies DYW domains like those of land plant RNA editing factors in diverse eukaryotes.
Schallenberg-Rüdinger M; Lenz H; Polsakiewicz M; Gott JM; Knoop V
RNA Biol; 2013; 10(9):1549-56. PubMed ID: 23899506
[TBL] [Abstract][Full Text] [Related]
14. One C-to-U RNA Editing Site and Two Independently Evolved Editing Factors: Testing Reciprocal Complementation with DYW-Type PPR Proteins from the Moss
Oldenkott B; Burger M; Hein AC; Jörg A; Senkler J; Braun HP; Knoop V; Takenaka M; Schallenberg-Rüdinger M
Plant Cell; 2020 Sep; 32(9):2997-3018. PubMed ID: 32616665
[TBL] [Abstract][Full Text] [Related]
15. Substitutional RNA Editing in Plant Organelles.
Ichinose M; Sugita M
Methods Mol Biol; 2021; 2181():1-12. PubMed ID: 32729071
[TBL] [Abstract][Full Text] [Related]
16. Conquering new grounds: plant organellar C-to-U RNA editing factors can be functional in the plant cytosol.
Thielen M; Gärtner B; Knoop V; Schallenberg-Rüdinger M; Lesch E
Plant J; 2024 May; ():. PubMed ID: 38753873
[TBL] [Abstract][Full Text] [Related]
17. A genome-wide identification and analysis of the DYW-deaminase genes in the pentatricopeptide repeat gene family in cotton (Gossypium spp.).
Zhang B; Liu G; Li X; Guo L; Zhang X; Qi T; Wang H; Tang H; Qiao X; Zhang J; Xing C; Wu J
PLoS One; 2017; 12(3):e0174201. PubMed ID: 28339482
[TBL] [Abstract][Full Text] [Related]
18. Structural insight into the activation of an Arabidopsis organellar C-to-U RNA editing enzyme by active site complementation.
Toma-Fukai S; Sawada Y; Maeda A; Shimizu H; Shikanai T; Takenaka M; Shimizu T
Plant Cell; 2023 May; 35(6):1888-1900. PubMed ID: 36342219
[TBL] [Abstract][Full Text] [Related]
19. The cytidine deaminase signature HxE(x)n CxxC of DYW1 binds zinc and is necessary for RNA editing of ndhD-1.
Boussardon C; Avon A; Kindgren P; Bond CS; Challenor M; Lurin C; Small I
New Phytol; 2014 Sep; 203(4):1090-1095. PubMed ID: 25041347
[TBL] [Abstract][Full Text] [Related]
20. Assigning DYW-type PPR proteins to RNA editing sites in the funariid mosses Physcomitrella patens and Funaria hygrometrica.
Rüdinger M; Szövényi P; Rensing SA; Knoop V
Plant J; 2011 Jul; 67(2):370-80. PubMed ID: 21466601
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
