These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

116 related articles for article (PubMed ID: 37678513)

  • 1. Comparative genomics sheds light on transcription factor-mediated regulation in the extreme acidophilic Acidithiobacillia representatives.
    Sepúlveda-Rebolledo P; González-Rosales C; Dopson M; Pérez-Rueda E; Holmes DS; Valdés JH
    Res Microbiol; 2024; 175(1-2):104135. PubMed ID: 37678513
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Integrative Genomics Sheds Light on Evolutionary Forces Shaping the Acidithiobacillia Class Acidophilic Lifestyle.
    González-Rosales C; Vergara E; Dopson M; Valdés JH; Holmes DS
    Front Microbiol; 2021; 12():822229. PubMed ID: 35242113
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Genomic evolution of the class Acidithiobacillia: deep-branching Proteobacteria living in extreme acidic conditions.
    Moya-Beltrán A; Beard S; Rojas-Villalobos C; Issotta F; Gallardo Y; Ulloa R; Giaveno A; Degli Esposti M; Johnson DB; Quatrini R
    ISME J; 2021 Nov; 15(11):3221-3238. PubMed ID: 34007059
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Pangenome-level analysis of nucleoid-associated proteins in the
    Beard S; Moya-Beltrán A; Silva-García D; Valenzuela C; Pérez-Acle T; Loyola A; Quatrini R
    Front Microbiol; 2023; 14():1271138. PubMed ID: 37817747
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Carbon, iron and sulfur metabolism in acidophilic micro-organisms.
    Barrie Johnson D; Hallberg KB
    Adv Microb Physiol; 2009; 54():201-55. PubMed ID: 18929069
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
    Rodionov DA; Novichkov PS; Stavrovskaya ED; Rodionova IA; Li X; Kazanov MD; Ravcheev DA; Gerasimova AV; Kazakov AE; Kovaleva GY; Permina EA; Laikova ON; Overbeek R; Romine MF; Fredrickson JK; Arkin AP; Dubchak I; Osterman AL; Gelfand MS
    BMC Genomics; 2011 Jun; 12 Suppl 1(Suppl 1):S3. PubMed ID: 21810205
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparative genomics and evolution of transcriptional regulons in
    Leyn SA; Suvorova IA; Kazakov AE; Ravcheev DA; Stepanova VV; Novichkov PS; Rodionov DA
    Microb Genom; 2016 Jul; 2(7):e000061. PubMed ID: 28348857
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome wide identification of Acidithiobacillus ferrooxidans (ATCC 23270) transcription factors and comparative analysis of ArsR and MerR metal regulators.
    Hödar C; Moreno P; di Genova A; Latorre M; Reyes-Jara A; Maass A; González M; Cambiazo V
    Biometals; 2012 Feb; 25(1):75-93. PubMed ID: 21830017
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RegPrecise 3.0--a resource for genome-scale exploration of transcriptional regulation in bacteria.
    Novichkov PS; Kazakov AE; Ravcheev DA; Leyn SA; Kovaleva GY; Sutormin RA; Kazanov MD; Riehl W; Arkin AP; Dubchak I; Rodionov DA
    BMC Genomics; 2013 Nov; 14():745. PubMed ID: 24175918
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bioinformatic prediction and experimental verification of Fur-regulated genes in the extreme acidophile Acidithiobacillus ferrooxidans.
    Quatrini R; Lefimil C; Veloso FA; Pedroso I; Holmes DS; Jedlicki E
    Nucleic Acids Res; 2007; 35(7):2153-66. PubMed ID: 17355989
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Polysaccharides utilization in human gut bacterium Bacteroides thetaiotaomicron: comparative genomics reconstruction of metabolic and regulatory networks.
    Ravcheev DA; Godzik A; Osterman AL; Rodionov DA
    BMC Genomics; 2013 Dec; 14():873. PubMed ID: 24330590
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparative genomics of transcriptional regulation of methionine metabolism in Proteobacteria.
    Leyn SA; Suvorova IA; Kholina TD; Sherstneva SS; Novichkov PS; Gelfand MS; Rodionov DA
    PLoS One; 2014; 9(11):e113714. PubMed ID: 25411846
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The DtxR protein acting as dual transcriptional regulator directs a global regulatory network involved in iron metabolism of Corynebacterium glutamicum.
    Brune I; Werner H; Hüser AT; Kalinowski J; Pühler A; Tauch A
    BMC Genomics; 2006 Feb; 7():21. PubMed ID: 16469103
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comparative genomic analysis of regulation of anaerobic respiration in ten genomes from three families of gamma-proteobacteria (Enterobacteriaceae, Pasteurellaceae, Vibrionaceae).
    Ravcheev DA; Gerasimova AV; Mironov AA; Gelfand MS
    BMC Genomics; 2007 Feb; 8():54. PubMed ID: 17313674
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Reconstruction of regulatory and metabolic pathways in metal-reducing delta-proteobacteria.
    Rodionov DA; Dubchak I; Arkin A; Alm E; Gelfand MS
    Genome Biol; 2004; 5(11):R90. PubMed ID: 15535866
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Computational reconstruction of iron- and manganese-responsive transcriptional networks in alpha-proteobacteria.
    Rodionov DA; Gelfand MS; Todd JD; Curson AR; Johnston AW
    PLoS Comput Biol; 2006 Dec; 2(12):e163. PubMed ID: 17173478
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Gene Loss and Horizontal Gene Transfer Contributed to the Genome Evolution of the Extreme Acidophile "Ferrovum".
    Ullrich SR; González C; Poehlein A; Tischler JS; Daniel R; Schlömann M; Holmes DS; Mühling M
    Front Microbiol; 2016; 7():797. PubMed ID: 27303384
    [TBL] [Abstract][Full Text] [Related]  

  • 18. In silico analysis of transcription factor repertoires and prediction of stress-responsive transcription factors from six major gramineae plants.
    Mochida K; Yoshida T; Sakurai T; Yamaguchi-Shinozaki K; Shinozaki K; Tran LS
    DNA Res; 2011 Oct; 18(5):321-32. PubMed ID: 21729923
    [TBL] [Abstract][Full Text] [Related]  

  • 19. AI-driven pan-proteome analyses reveal insights into the biohydrometallurgical properties of
    Li L; Zhou L; Jiang C; Liu Z; Meng D; Luo F; He Q; Yin H
    Front Microbiol; 2023; 14():1243987. PubMed ID: 37744906
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Influence of mobile genetic elements and insertion sequences in long- and short-term adaptive processes of Acidithiobacillus ferrooxidans strains.
    Moya-Beltrán A; Gajdosik M; Rojas-Villalobos C; Beard S; Mandl M; Silva-García D; Johnson DB; Ramirez P; Quatrini R; Kucera J
    Sci Rep; 2023 Jul; 13(1):10876. PubMed ID: 37407610
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.