These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

208 related articles for article (PubMed ID: 37720007)

  • 1. WSIC: a Python package and command-line interface for fast whole slide image conversion.
    Pocock J; Raza SEA; Minhas F; Rajpoot N
    Bioinform Adv; 2023; 3(1):vbad122. PubMed ID: 37720007
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Dicom_wsi: A Python Implementation for Converting Whole-Slide Images to Digital Imaging and Communications in Medicine Compliant Files.
    Gu Q; Prodduturi N; Jiang J; Flotte TJ; Hart SN
    J Pathol Inform; 2021; 12():21. PubMed ID: 34267986
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Deep learning-based framework for slide-based histopathological image analysis.
    Kosaraju S; Park J; Lee H; Yang JW; Kang M
    Sci Rep; 2022 Nov; 12(1):19075. PubMed ID: 36351997
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Virtual alignment of pathology image series for multi-gigapixel whole slide images.
    Gatenbee CD; Baker AM; Prabhakaran S; Swinyard O; Slebos RJC; Mandal G; Mulholland E; Andor N; Marusyk A; Leedham S; Conejo-Garcia JR; Chung CH; Robertson-Tessi M; Graham TA; Anderson ARA
    Nat Commun; 2023 Jul; 14(1):4502. PubMed ID: 37495577
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Optimized JPEG 2000 Compression for Efficient Storage of Histopathological Whole-Slide Images.
    Helin H; Tolonen T; Ylinen O; Tolonen P; Näpänkangas J; Isola J
    J Pathol Inform; 2018; 9():20. PubMed ID: 29910969
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines.
    Meunier D; Pascarella A; Altukhov D; Jas M; Combrisson E; Lajnef T; Bertrand-Dubois D; Hadid V; Alamian G; Alves J; Barlaam F; Saive AL; Dehgan A; Jerbi K
    Neuroimage; 2020 Oct; 219():117020. PubMed ID: 32522662
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Python library for FAIRer access and deposition to the Metabolomics Workbench Data Repository.
    Smelter A; Moseley HNB
    Metabolomics; 2018; 14(5):64. PubMed ID: 29706851
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Multi-scale representation attention based deep multiple instance learning for gigapixel whole slide image analysis.
    Xiang H; Shen J; Yan Q; Xu M; Shi X; Zhu X
    Med Image Anal; 2023 Oct; 89():102890. PubMed ID: 37467642
    [TBL] [Abstract][Full Text] [Related]  

  • 9. FlexTileSource: An OpenSeadragon Extension for Efficient Whole-Slide Image Visualization.
    Schüffler PJ; Ozcan GG; Al-Ahmadie H; Fuchs TJ
    J Pathol Inform; 2021; 12():31. PubMed ID: 34760328
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Safe "cloudification" of large images through picker APIs.
    Bremer E; Kurc T; Gao Y; Saltz J; Almeida JS
    AMIA Annu Symp Proc; 2016; 2016():342-351. PubMed ID: 28269829
    [TBL] [Abstract][Full Text] [Related]  

  • 11. psm_utils: A High-Level Python API for Parsing and Handling Peptide-Spectrum Matches and Proteomics Search Results.
    Gabriels R; Declercq A; Bouwmeester R; Degroeve S; Martens L
    J Proteome Res; 2023 Feb; 22(2):557-560. PubMed ID: 36508242
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GSEApy: a comprehensive package for performing gene set enrichment analysis in Python.
    Fang Z; Liu X; Peltz G
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36426870
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Unleash the Power of State Space Model for Whole Slide Image with Local Aware Scanning and Importance Resampling.
    Huang Y; Zhao W; Fu Y; Zhu L; Yu L
    IEEE Trans Med Imaging; 2024 Oct; PP():. PubMed ID: 39374278
    [TBL] [Abstract][Full Text] [Related]  

  • 14. QuArray: an application for tissue array whole slide image export and signal analysis.
    Arthurs C; Ahmed A
    Bioinformatics; 2021 Sep; 37(18):3082-3083. PubMed ID: 33690813
    [TBL] [Abstract][Full Text] [Related]  

  • 15. orfipy: a fast and flexible tool for extracting ORFs.
    Singh U; Wurtele ES
    Bioinformatics; 2021 Sep; 37(18):3019-3020. PubMed ID: 33576786
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Whole slide images as non-fungible tokens: A decentralized approach to secure, scalable data storage and access.
    Brickman A; Baykara Y; Carabaño M; Hacking SM
    J Pathol Inform; 2024 Dec; 15():100350. PubMed ID: 38162951
    [TBL] [Abstract][Full Text] [Related]  

  • 17. synphage: a pipeline for phage genome synteny graphics focused on gene conservation.
    Grosboillot V; Dragoš A
    Bioinform Adv; 2024; 4(1):vbae126. PubMed ID: 39224836
    [TBL] [Abstract][Full Text] [Related]  

  • 18. OpenPhi: an interface to access Philips iSyntax whole slide images for computational pathology.
    Mulliqi N; Kartasalo K; Olsson H; Ji X; Egevad L; Eklund M; Ruusuvuori P
    Bioinformatics; 2021 Nov; 37(21):3995-3997. PubMed ID: 34358287
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Publication-ready single nucleotide polymorphism visualization with snipit.
    O'Toole Á; Aziz A; Maloney D
    Bioinformatics; 2024 Aug; 40(8):. PubMed ID: 39137137
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Primerdiffer: a python command-line module for large-scale primer design in haplotype genotyping.
    Ren X; Shao Y; Zhang Y; Ni Y; Bi Y; Li R
    Bioinformatics; 2023 Apr; 39(4):. PubMed ID: 37067484
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.