273 related articles for article (PubMed ID: 37728997)
1. Characterization of Proteoform Post-Translational Modifications by Top-Down and Bottom-Up Mass Spectrometry in Conjunction with Annotations.
Chen W; Ding Z; Zang Y; Liu X
J Proteome Res; 2023 Oct; 22(10):3178-3189. PubMed ID: 37728997
[TBL] [Abstract][Full Text] [Related]
2. Characterization of proteoform post-translational modifications by top-down and bottom-up mass spectrometry in conjunction with UniProt annotations.
Chen W; Ding Z; Zang Y; Liu X
bioRxiv; 2023 Apr; ():. PubMed ID: 37066296
[TBL] [Abstract][Full Text] [Related]
3. Improving Proteoform Identifications in Complex Systems Through Integration of Bottom-Up and Top-Down Data.
Schaffer LV; Millikin RJ; Shortreed MR; Scalf M; Smith LM
J Proteome Res; 2020 Aug; 19(8):3510-3517. PubMed ID: 32584579
[TBL] [Abstract][Full Text] [Related]
4. Identification of ultramodified proteins using top-down tandem mass spectra.
Liu X; Hengel S; Wu S; Tolić N; Pasa-Tolić L; Pevzner PA
J Proteome Res; 2013 Dec; 12(12):5830-8. PubMed ID: 24188097
[TBL] [Abstract][Full Text] [Related]
5. Top-"Double-Down" Mass Spectrometry of Histone H4 Proteoforms: Tandem Ultraviolet-Photon and Mobility/Mass-Selected Electron Capture Dissociations.
Jeanne Dit Fouque K; Miller SA; Pham K; Bhanu NV; Cintron-Diaz YL; Leyva D; Kaplan D; Voinov VG; Ridgeway ME; Park MA; Garcia BA; Fernandez-Lima F
Anal Chem; 2022 Nov; 94(44):15377-15385. PubMed ID: 36282112
[TBL] [Abstract][Full Text] [Related]
6. Characterization of Proteoforms with Unknown Post-translational Modifications Using the MIScore.
Kou Q; Zhu B; Wu S; Ansong C; Tolić N; Paša-Tolić L; Liu X
J Proteome Res; 2016 Aug; 15(8):2422-32. PubMed ID: 27291504
[TBL] [Abstract][Full Text] [Related]
7. Top-down characterization of chicken core histones.
Wu H; Xiao K; Tian Z
J Proteomics; 2018 Jul; 184():34-38. PubMed ID: 29935335
[TBL] [Abstract][Full Text] [Related]
8. Discovery of Unknown Posttranslational Modifications by Top-Down Mass Spectrometry.
Wilson JW; Zhou M
Methods Mol Biol; 2022; 2500():181-199. PubMed ID: 35657594
[TBL] [Abstract][Full Text] [Related]
9. FLAG-KRAS4B as a Model System for KRAS4B Proteoform and PTM Evaluation by Mass Spectrometry.
D'Ippolito RA; Scheidemantle GM; Smith BP; Powell K; Eury S; Neish A; Mehalko J; Beaumont L; Fer N; Wall V; Burgan W; Maciag AE; Esposito D; DeHart CJ
Methods Mol Biol; 2024; 2797():299-322. PubMed ID: 38570469
[TBL] [Abstract][Full Text] [Related]
10. Top-Down Ion Mobility Separations of Isomeric Proteoforms.
Berthias F; Thurman HA; Wijegunawardena G; Wu H; Shvartsburg AA; Jensen ON
Anal Chem; 2023 Jan; 95(2):784-791. PubMed ID: 36562749
[TBL] [Abstract][Full Text] [Related]
11. MASH Suite Pro: A Comprehensive Software Tool for Top-Down Proteomics.
Cai W; Guner H; Gregorich ZR; Chen AJ; Ayaz-Guner S; Peng Y; Valeja SG; Liu X; Ge Y
Mol Cell Proteomics; 2016 Feb; 15(2):703-14. PubMed ID: 26598644
[TBL] [Abstract][Full Text] [Related]
12. Quantifying Homologous Proteins and Proteoforms.
Malioutov D; Chen T; Airoldi E; Jaffe J; Budnik B; Slavov N
Mol Cell Proteomics; 2019 Jan; 18(1):162-168. PubMed ID: 30282776
[TBL] [Abstract][Full Text] [Related]
13. Capillary zone electrophoresis-high field asymmetric ion mobility spectrometry-tandem mass spectrometry for top-down characterization of histone proteoforms.
Wang Q; Fang F; Wang Q; Sun L
Proteomics; 2024 Feb; 24(3-4):e2200389. PubMed ID: 37963825
[TBL] [Abstract][Full Text] [Related]
14. Spritz: A Proteogenomic Database Engine.
Cesnik AJ; Miller RM; Ibrahim K; Lu L; Millikin RJ; Shortreed MR; Frey BL; Smith LM
J Proteome Res; 2021 Apr; 20(4):1826-1834. PubMed ID: 32967423
[TBL] [Abstract][Full Text] [Related]
15. Proteoform Analysis and Construction of Proteoform Families in Proteoform Suite.
Schaffer LV; Shortreed MR; Smith LM
Methods Mol Biol; 2022; 2500():67-81. PubMed ID: 35657588
[TBL] [Abstract][Full Text] [Related]
16. The first pilot project of the consortium for top-down proteomics: a status report.
Dang X; Scotcher J; Wu S; Chu RK; Tolić N; Ntai I; Thomas PM; Fellers RT; Early BP; Zheng Y; Durbin KR; Leduc RD; Wolff JJ; Thompson CJ; Pan J; Han J; Shaw JB; Salisbury JP; Easterling M; Borchers CH; Brodbelt JS; Agar JN; Paša-Tolić L; Kelleher NL; Young NL
Proteomics; 2014 May; 14(10):1130-40. PubMed ID: 24644084
[TBL] [Abstract][Full Text] [Related]
17. TopPIC: a software tool for top-down mass spectrometry-based proteoform identification and characterization.
Kou Q; Xun L; Liu X
Bioinformatics; 2016 Nov; 32(22):3495-3497. PubMed ID: 27423895
[TBL] [Abstract][Full Text] [Related]
18. Top Down Proteomics Reveals Mature Proteoforms Expressed in Subcellular Fractions of the Echinococcus granulosus Preadult Stage.
Lorenzatto KR; Kim K; Ntai I; Paludo GP; Camargo de Lima J; Thomas PM; Kelleher NL; Ferreira HB
J Proteome Res; 2015 Nov; 14(11):4805-14. PubMed ID: 26465659
[TBL] [Abstract][Full Text] [Related]
19. One-Pot Quantitative Top- and Middle-Down Analysis of GluC-Digested Histone H4.
Holt MV; Wang T; Young NL
J Am Soc Mass Spectrom; 2019 Dec; 30(12):2514-2525. PubMed ID: 31147891
[TBL] [Abstract][Full Text] [Related]
20. Comparing Top-Down Proteoform Identification: Deconvolution, PrSM Overlap, and PTM Detection.
Tabb DL; Jeong K; Druart K; Gant MS; Brown KA; Nicora C; Zhou M; Couvillion S; Nakayasu E; Williams JE; Peterson HK; McGuire MK; McGuire MA; Metz TO; Chamot-Rooke J
J Proteome Res; 2023 Jul; 22(7):2199-2217. PubMed ID: 37235544
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
