These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 37729135)

  • 1. AlignStatPlot: An R package and online tool for robust sequence alignment statistics and innovative visualization of big data.
    Alsamman AM; El Allali A; Mokhtar MM; Al-Sham'aa K; Nassar AE; Mousa KH; Kehel Z
    PLoS One; 2023; 18(9):e0291204. PubMed ID: 37729135
    [TBL] [Abstract][Full Text] [Related]  

  • 2. ggmsa: a visual exploration tool for multiple sequence alignment and associated data.
    Zhou L; Feng T; Xu S; Gao F; Lam TT; Wang Q; Wu T; Huang H; Zhan L; Li L; Guan Y; Dai Z; Yu G
    Brief Bioinform; 2022 Jul; 23(4):. PubMed ID: 35671504
    [TBL] [Abstract][Full Text] [Related]  

  • 3. LMAP_S: Lightweight Multigene Alignment and Phylogeny eStimation.
    Maldonado E; Antunes A
    BMC Bioinformatics; 2019 Dec; 20(1):739. PubMed ID: 31888452
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SuiteMSA: visual tools for multiple sequence alignment comparison and molecular sequence simulation.
    Anderson CL; Strope CL; Moriyama EN
    BMC Bioinformatics; 2011 May; 12():184. PubMed ID: 21600033
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A survey on the algorithm and development of multiple sequence alignment.
    Zhang Y; Zhang Q; Zhou J; Zou Q
    Brief Bioinform; 2022 May; 23(3):. PubMed ID: 35272347
    [TBL] [Abstract][Full Text] [Related]  

  • 6. msa: an R package for multiple sequence alignment.
    Bodenhofer U; Bonatesta E; Horejš-Kainrath C; Hochreiter S
    Bioinformatics; 2015 Dec; 31(24):3997-9. PubMed ID: 26315911
    [TBL] [Abstract][Full Text] [Related]  

  • 7. AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments.
    Shafee T; Cooke I
    BMC Bioinformatics; 2016 Oct; 17(1):434. PubMed ID: 27784265
    [TBL] [Abstract][Full Text] [Related]  

  • 8. NX4: a web-based visualization of large multiple sequence alignments.
    Solano-Roman A; Cruz-Castillo C; Offenhuber D; Colubri A
    Bioinformatics; 2019 Nov; 35(22):4800-4802. PubMed ID: 31161215
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization.
    Katoh K; Rozewicki J; Yamada KD
    Brief Bioinform; 2019 Jul; 20(4):1160-1166. PubMed ID: 28968734
    [TBL] [Abstract][Full Text] [Related]  

  • 10. FAME: fast and memory efficient multiple sequences alignment tool through compatible chain of roots.
    Naznooshsadat E; Elham P; Ali SZ
    Bioinformatics; 2020 Jun; 36(12):3662-3668. PubMed ID: 32170927
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Multiple alignment of DNA sequences with MAFFT.
    Katoh K; Asimenos G; Toh H
    Methods Mol Biol; 2009; 537():39-64. PubMed ID: 19378139
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Characterization of multiple sequence alignment errors using complete-likelihood score and position-shift map.
    Ezawa K
    BMC Bioinformatics; 2016 Mar; 17():133. PubMed ID: 26992851
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Java bioinformatics analysis web services for multiple sequence alignment--JABAWS:MSA.
    Troshin PV; Procter JB; Barton GJ
    Bioinformatics; 2011 Jul; 27(14):2001-2. PubMed ID: 21593132
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Multiple Sequence Alignment Computation Using the T-Coffee Regressive Algorithm Implementation.
    Garriga E; Di Tommaso P; Magis C; Erb I; Mansouri L; Baltzis A; Floden E; Notredame C
    Methods Mol Biol; 2021; 2231():89-97. PubMed ID: 33289888
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Protein multiple sequence alignment benchmarking through secondary structure prediction.
    Le Q; Sievers F; Higgins DG
    Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PROMALS3D: multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information.
    Pei J; Grishin NV
    Methods Mol Biol; 2014; 1079():263-71. PubMed ID: 24170408
    [TBL] [Abstract][Full Text] [Related]  

  • 17. PASTASpark: multiple sequence alignment meets Big Data.
    Abuín JM; Pena TF; Pichel JC
    Bioinformatics; 2017 Sep; 33(18):2948-2950. PubMed ID: 28582480
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A benchmark study of sequence alignment methods for protein clustering.
    Wang Y; Wu H; Cai Y
    BMC Bioinformatics; 2018 Dec; 19(Suppl 19):529. PubMed ID: 30598070
    [TBL] [Abstract][Full Text] [Related]  

  • 19. dcGOR: an R package for analysing ontologies and protein domain annotations.
    Fang H
    PLoS Comput Biol; 2014 Oct; 10(10):e1003929. PubMed ID: 25356683
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 7.