151 related articles for article (PubMed ID: 37758154)
1. Local defocus estimation in single particle analysis in cryo-electron microscopy.
Fernandez-Gimenez E; Carazo JM; Sorzano COS
J Struct Biol; 2023 Dec; 215(4):108030. PubMed ID: 37758154
[TBL] [Abstract][Full Text] [Related]
2. A Robust Single-Particle Cryo-Electron Microscopy (cryo-EM) Processing Workflow with cryoSPARC, RELION, and Scipion.
DiIorio MC; Kulczyk AW
J Vis Exp; 2022 Jan; (179):. PubMed ID: 35104261
[TBL] [Abstract][Full Text] [Related]
3. Gctf: Real-time CTF determination and correction.
Zhang K
J Struct Biol; 2016 Jan; 193(1):1-12. PubMed ID: 26592709
[TBL] [Abstract][Full Text] [Related]
4. Efficient 3D-CTF correction for cryo-electron tomography using NovaCTF improves subtomogram averaging resolution to 3.4Å.
Turoňová B; Schur FKM; Wan W; Briggs JAG
J Struct Biol; 2017 Sep; 199(3):187-195. PubMed ID: 28743638
[TBL] [Abstract][Full Text] [Related]
5. Using RELION software within the Scipion framework.
Sharov G; Morado DR; Carroni M; de la Rosa-Trevín JM
Acta Crystallogr D Struct Biol; 2021 Apr; 77(Pt 4):403-410. PubMed ID: 33825701
[TBL] [Abstract][Full Text] [Related]
6. Cryo-EM and Single-Particle Analysis with Scipion.
Jiménez-Moreno A; Del Caño L; Martínez M; Ramírez-Aportela E; Cuervo A; Melero R; Sánchez-García R; Strelak D; Fernández-Giménez E; de Isidro-Gómez FP; Herreros D; Conesa P; Fonseca Y; Maluenda D; Jiménez de la Morena J; Macías JR; Losana P; Marabini R; Carazo JM; Sorzano COS
J Vis Exp; 2021 May; (171):. PubMed ID: 34125107
[TBL] [Abstract][Full Text] [Related]
7. Localized reconstruction in Scipion expedites the analysis of symmetry mismatches in cryo-EM data.
Abrishami V; Ilca SL; Gomez-Blanco J; Rissanen I; de la Rosa-Trevín JM; Reddy VS; Carazo JM; Huiskonen JT
Prog Biophys Mol Biol; 2021 Mar; 160():43-52. PubMed ID: 32470354
[TBL] [Abstract][Full Text] [Related]
8. IceBreaker: Software for high-resolution single-particle cryo-EM with non-uniform ice.
Olek M; Cowtan K; Webb D; Chaban Y; Zhang P
Structure; 2022 Apr; 30(4):522-531.e4. PubMed ID: 35150604
[TBL] [Abstract][Full Text] [Related]
9. Volta phase plate data collection facilitates image processing and cryo-EM structure determination.
von Loeffelholz O; Papai G; Danev R; Myasnikov AG; Natchiar SK; Hazemann I; Ménétret JF; Klaholz BP
J Struct Biol; 2018 Jun; 202(3):191-199. PubMed ID: 29337113
[TBL] [Abstract][Full Text] [Related]
10.
Grant T; Rohou A; Grigorieff N
Elife; 2018 Mar; 7():. PubMed ID: 29513216
[TBL] [Abstract][Full Text] [Related]
11. TomoAlign: A novel approach to correcting sample motion and 3D CTF in CryoET.
Fernandez JJ; Li S
J Struct Biol; 2021 Dec; 213(4):107778. PubMed ID: 34416376
[TBL] [Abstract][Full Text] [Related]
12. A particle-filter framework for robust cryo-EM 3D reconstruction.
Hu M; Yu H; Gu K; Wang Z; Ruan H; Wang K; Ren S; Li B; Gan L; Xu S; Yang G; Shen Y; Li X
Nat Methods; 2018 Dec; 15(12):1083-1089. PubMed ID: 30504871
[TBL] [Abstract][Full Text] [Related]
13. Quantifying resolution limiting factors in subtomogram averaged cryo-electron tomography using simulations.
Voortman LM; Vulović M; Maletta M; Voigt A; Franken EM; Simonetti A; Peters PJ; van Vliet LJ; Rieger B
J Struct Biol; 2014 Aug; 187(2):103-111. PubMed ID: 24998892
[TBL] [Abstract][Full Text] [Related]
14. Contrast transfer function correction applied to cryo-electron tomography and sub-tomogram averaging.
Zanetti G; Riches JD; Fuller SD; Briggs JA
J Struct Biol; 2009 Nov; 168(2):305-12. PubMed ID: 19666126
[TBL] [Abstract][Full Text] [Related]
15. Electron cryo-microscopy for elucidating the dynamic nature of live-protein complexes.
Shigematsu H
Biochim Biophys Acta Gen Subj; 2020 Feb; 1864(2):129436. PubMed ID: 31525409
[TBL] [Abstract][Full Text] [Related]
16. Processing of Structurally Heterogeneous Cryo-EM Data in RELION.
Scheres SH
Methods Enzymol; 2016; 579():125-57. PubMed ID: 27572726
[TBL] [Abstract][Full Text] [Related]
17. Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods.
Sorzano COS; Jiménez-Moreno A; Maluenda D; Ramírez-Aportela E; Martínez M; Cuervo A; Melero R; Conesa JJ; Sánchez-García R; Strelak D; Filipovic J; Fernández-Giménez E; de Isidro-Gómez F; Herreros D; Conesa P; Del Caño L; Fonseca Y; de la Morena JJ; Macías JR; Losana P; Marabini R; Carazo JM
Methods Mol Biol; 2021; 2305():257-289. PubMed ID: 33950394
[TBL] [Abstract][Full Text] [Related]
18. Sparseness and Smoothness Regularized Imaging for improving the resolution of Cryo-EM single-particle reconstruction.
Luo Z; Campos-Acevedo AA; Lv L; Wang Q; Ma J
Proc Natl Acad Sci U S A; 2021 Jan; 118(2):. PubMed ID: 33402531
[TBL] [Abstract][Full Text] [Related]
19. Accurate modeling of single-particle cryo-EM images quantitates the benefits expected from using Zernike phase contrast.
Hall RJ; Nogales E; Glaeser RM
J Struct Biol; 2011 Jun; 174(3):468-75. PubMed ID: 21463690
[TBL] [Abstract][Full Text] [Related]
20. FASTDEF: fast defocus and astigmatism estimation for high-throughput transmission electron microscopy.
Vargas J; Otón J; Marabini R; Jonic S; de la Rosa-Trevín JM; Carazo JM; Sorzano CO
J Struct Biol; 2013 Feb; 181(2):136-48. PubMed ID: 23261401
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]