BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 37798248)

  • 21. The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies.
    Wang W; Das A; Kainer D; Schalamun M; Morales-Suarez A; Schwessinger B; Lanfear R
    Gigascience; 2020 Jan; 9(1):. PubMed ID: 31895413
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Complex genome assembly based on long-read sequencing.
    Zhang T; Zhou J; Gao W; Jia Y; Wei Y; Wang G
    Brief Bioinform; 2022 Sep; 23(5):. PubMed ID: 35940845
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Evaluation of nine popular de novo assemblers in microbial genome assembly.
    Forouzan E; Maleki MSM; Karkhane AA; Yakhchali B
    J Microbiol Methods; 2017 Dec; 143():32-37. PubMed ID: 28939423
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Benchmarking multi-platform sequencing technologies for human genome assembly.
    Wang J; Veldsman WP; Fang X; Huang Y; Xie X; Lyu A; Zhang L
    Brief Bioinform; 2023 Sep; 24(5):. PubMed ID: 37594299
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Fast Short Read De-Novo Assembly Using Overlap-Layout-Consensus Approach.
    Bayat A; Deshpande NP; Wilkins MR; Parameswaran S
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(1):334-338. PubMed ID: 30307874
    [TBL] [Abstract][Full Text] [Related]  

  • 26. HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.
    Huang S; Kang M; Xu A
    Bioinformatics; 2017 Aug; 33(16):2577-2579. PubMed ID: 28407147
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Fragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity Calculations.
    García-López R; Vázquez-Castellanos JF; Moya A
    Front Bioeng Biotechnol; 2015; 3():141. PubMed ID: 26442255
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Comparison of De Novo Assembly Strategies for Bacterial Genomes.
    Zhang P; Jiang D; Wang Y; Yao X; Luo Y; Yang Z
    Int J Mol Sci; 2021 Jul; 22(14):. PubMed ID: 34299288
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Evaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.
    Lin HH; Liao YC
    PLoS One; 2015; 10(12):e0144305. PubMed ID: 26641475
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools.
    Derakhshani H; Bernier SP; Marko VA; Surette MG
    BMC Genomics; 2020 Jul; 21(1):519. PubMed ID: 32727443
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Benchmarking hybrid assembly approaches for genomic analyses of bacterial pathogens using Illumina and Oxford Nanopore sequencing.
    Chen Z; Erickson DL; Meng J
    BMC Genomics; 2020 Sep; 21(1):631. PubMed ID: 32928108
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Haplotyping-Assisted Diploid Assembly and Variant Detection with Linked Reads.
    Hu Y; Yang C; Zhang L; Zhou X
    Methods Mol Biol; 2023; 2590():161-182. PubMed ID: 36335499
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case.
    Wang W; Schalamun M; Morales-Suarez A; Kainer D; Schwessinger B; Lanfear R
    BMC Genomics; 2018 Dec; 19(1):977. PubMed ID: 30594129
    [TBL] [Abstract][Full Text] [Related]  

  • 34. B-assembler: a circular bacterial genome assembler.
    Huang F; Xiao L; Gao M; Vallely EJ; Dybvig K; Atkinson TP; Waites KB; Chong Z
    BMC Genomics; 2022 May; 23(Suppl 4):361. PubMed ID: 35546658
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The impact of applying various de novo assembly and correction tools on the identification of genome characterization, drug resistance, and virulence factors of clinical isolates using ONT sequencing.
    Safar HA; Alatar F; Nasser K; Al-Ajmi R; Alfouzan W; Mustafa AS
    BMC Biotechnol; 2023 Jul; 23(1):26. PubMed ID: 37525145
    [TBL] [Abstract][Full Text] [Related]  

  • 36. NovoGraph: Human genome graph construction from multiple long-read
    Biederstedt E; Oliver JC; Hansen NF; Jajoo A; Dunn N; Olson A; Busby B; Dilthey AT
    F1000Res; 2018; 7():1391. PubMed ID: 30613392
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Accurate long-read de novo assembly evaluation with Inspector.
    Chen Y; Zhang Y; Wang AY; Gao M; Chong Z
    Genome Biol; 2021 Nov; 22(1):312. PubMed ID: 34775997
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Identifying and removing haplotypic duplication in primary genome assemblies.
    Guan D; McCarthy SA; Wood J; Howe K; Wang Y; Durbin R
    Bioinformatics; 2020 May; 36(9):2896-2898. PubMed ID: 31971576
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Genome assembly using Nanopore-guided long and error-free DNA reads.
    Madoui MA; Engelen S; Cruaud C; Belser C; Bertrand L; Alberti A; Lemainque A; Wincker P; Aury JM
    BMC Genomics; 2015 Apr; 16(1):327. PubMed ID: 25927464
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Assembly collapsing versus heterozygosity oversizing: detection of homokaryotic and heterokaryotic
    Ángeles-Argáiz RE; Aguirre-Beltrán LFL; Hernández-Oaxaca D; Quintero-Corrales C; Trujillo-Roldán MA; Castillo-Ramírez S; Garibay-Orijel R
    Microb Genom; 2024 Mar; 10(3):. PubMed ID: 38529901
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.