These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 37824017)

  • 1. Detecting DNA Loops Using Tethered Particle Motion.
    Qian J; Collette D; Finzi L; Dunlap D
    Methods Mol Biol; 2024; 2694():451-466. PubMed ID: 37824017
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Bead size effects on protein-mediated DNA looping in tethered-particle motion experiments.
    Milstein JN; Chen YF; Meiners JC
    Biopolymers; 2011 Feb; 95(2):144-50. PubMed ID: 20882535
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Lac repressor hinge flexibility and DNA looping: single molecule kinetics by tethered particle motion.
    Vanzi F; Broggio C; Sacconi L; Pavone FS
    Nucleic Acids Res; 2006; 34(12):3409-20. PubMed ID: 16835309
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Tethered particle motion reveals that LacI·DNA loops coexist with a competitor-resistant but apparently unlooped conformation.
    Revalee JD; Blab GA; Wilson HD; Kahn JD; Meiners JC
    Biophys J; 2014 Feb; 106(3):705-15. PubMed ID: 24507611
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiple LacI-mediated loops revealed by Bayesian statistics and tethered particle motion.
    Johnson S; van de Meent JW; Phillips R; Wiggins CH; Lindén M
    Nucleic Acids Res; 2014; 42(16):10265-77. PubMed ID: 25120267
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Lac repressor mediated DNA looping: Monte Carlo simulation of constrained DNA molecules complemented with current experimental results.
    Biton YY; Kumar S; Dunlap D; Swigon D
    PLoS One; 2014; 9(5):e92475. PubMed ID: 24800809
    [TBL] [Abstract][Full Text] [Related]  

  • 7. First-principles calculation of DNA looping in tethered particle experiments.
    Towles KB; Beausang JF; Garcia HG; Phillips R; Nelson PC
    Phys Biol; 2009 Jul; 6(2):025001. PubMed ID: 19571369
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Diffusive hidden Markov model characterization of DNA looping dynamics in tethered particle experiments.
    Beausang JF; Nelson PC
    Phys Biol; 2007 Oct; 4(3):205-19. PubMed ID: 17928659
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DNA looping kinetics analyzed using diffusive hidden Markov model.
    Beausang JF; Zurla C; Manzo C; Dunlap D; Finzi L; Nelson PC
    Biophys J; 2007 Apr; 92(8):L64-6. PubMed ID: 17277177
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Quantitation of interactions between two DNA loops demonstrates loop domain insulation in E. coli cells.
    Priest DG; Kumar S; Yan Y; Dunlap DD; Dodd IB; Shearwin KE
    Proc Natl Acad Sci U S A; 2014 Oct; 111(42):E4449-57. PubMed ID: 25288735
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Positive supercoiling favors transcription elongation through lac repressor-mediated DNA loops.
    Xu W; Yan Y; Artsimovitch I; Dunlap D; Finzi L
    Nucleic Acids Res; 2022 Mar; 50(5):2826-2835. PubMed ID: 35188572
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Tetramer opening in LacI-mediated DNA looping.
    Rutkauskas D; Zhan H; Matthews KS; Pavone FS; Vanzi F
    Proc Natl Acad Sci U S A; 2009 Sep; 106(39):16627-32. PubMed ID: 19805348
    [TBL] [Abstract][Full Text] [Related]  

  • 13. DNA modeling reveals an extended lac repressor conformation in classic in vitro binding assays.
    Hirsh AD; Lillian TD; Lionberger TA; Perkins NC
    Biophys J; 2011 Aug; 101(3):718-26. PubMed ID: 21806940
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Probing DNA conformational changes with high temporal resolution by tethered particle motion.
    Manghi M; Tardin C; Baglio J; Rousseau P; Salomé L; Destainville N
    Phys Biol; 2010 Oct; 7(4):046003. PubMed ID: 20952812
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High-throughput single-molecule analysis of DNA-protein interactions by tethered particle motion.
    Plénat T; Tardin C; Rousseau P; Salomé L
    Nucleic Acids Res; 2012 Jul; 40(12):e89. PubMed ID: 22422843
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Designed hyperstable Lac repressor.DNA loop topologies suggest alternative loop geometries.
    Mehta RA; Kahn JD
    J Mol Biol; 1999 Nov; 294(1):67-77. PubMed ID: 10556029
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Interplay of protein and DNA structure revealed in simulations of the lac operon.
    Czapla L; Grosner MA; Swigon D; Olson WK
    PLoS One; 2013; 8(2):e56548. PubMed ID: 23457581
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Single-particle tracking for DNA tether length monitoring.
    Pouget N; Dennis C; Turlan C; Grigoriev M; Chandler M; Salomé L
    Nucleic Acids Res; 2004 May; 32(9):e73. PubMed ID: 15155821
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements.
    Hao N; Sneppen K; Shearwin KE; Dodd IB
    Nucleic Acids Res; 2017 May; 45(9):5074-5085. PubMed ID: 28160597
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Concentration and length dependence of DNA looping in transcriptional regulation.
    Han L; Garcia HG; Blumberg S; Towles KB; Beausang JF; Nelson PC; Phillips R
    PLoS One; 2009 May; 4(5):e5621. PubMed ID: 19479049
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.