These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
123 related articles for article (PubMed ID: 37846034)
21. A protein domain interaction interface database: InterPare. Gong S; Park C; Choi H; Ko J; Jang I; Lee J; Bolser DM; Oh D; Kim DS; Bhak J BMC Bioinformatics; 2005 Aug; 6():207. PubMed ID: 16122378 [TBL] [Abstract][Full Text] [Related]
22. PolyFold: An interactive visual simulator for distance-based protein folding. McGehee AJ; Bhattacharya S; Roche R; Bhattacharya D PLoS One; 2020; 15(12):e0243331. PubMed ID: 33270805 [TBL] [Abstract][Full Text] [Related]
23. PPiClust: efficient clustering of 3D protein-protein interaction interfaces. Aung Z; Tan SH; Ng SK; Tan KL J Bioinform Comput Biol; 2008 Jun; 6(3):415-33. PubMed ID: 18574857 [TBL] [Abstract][Full Text] [Related]
24. YAMACS: a graphical interface for GROMACS. Sarkar A; Santoro J; Di Biasi L; Marrafino F; Piotto S Bioinformatics; 2022 Sep; 38(19):4645-4646. PubMed ID: 35997557 [TBL] [Abstract][Full Text] [Related]
25. WebStruct and VisualStruct: Web interfaces and visualization for Structure software implemented in a cluster environment. Jayashree B; Rajgopal S; Hoisington D; Prasanth VP; Chandra S J Integr Bioinform; 2008 Sep; 5(1):. PubMed ID: 20134055 [TBL] [Abstract][Full Text] [Related]
26. MDContactCom: a tool to identify differences of protein molecular dynamics from two MD simulation trajectories in terms of interresidue contacts. Motono C; Yanagida S; Sato M; Hirokawa T Bioinformatics; 2021 Dec; 38(1):273-274. PubMed ID: 34289011 [TBL] [Abstract][Full Text] [Related]
27. Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces. Bordner AJ; Gorin AA BMC Bioinformatics; 2008 May; 9():234. PubMed ID: 18474114 [TBL] [Abstract][Full Text] [Related]
28. SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces. Teyra J; Doms A; Schroeder M; Pisabarro MT BMC Bioinformatics; 2006 Mar; 7():104. PubMed ID: 16512892 [TBL] [Abstract][Full Text] [Related]
30. Distinguishing crystallographic from biological interfaces in protein complexes: role of intermolecular contacts and energetics for classification. Elez K; Bonvin AMJJ; Vangone A BMC Bioinformatics; 2018 Nov; 19(Suppl 15):438. PubMed ID: 30497368 [TBL] [Abstract][Full Text] [Related]
31. Protein-protein interface detection using the energy centrality relationship (ECR) characteristic of proteins. Sudarshan S; Kodathala SB; Mahadik AC; Mehta I; Beck BW PLoS One; 2014; 9(5):e97115. PubMed ID: 24830938 [TBL] [Abstract][Full Text] [Related]
32. PDIviz: analysis and visualization of protein-DNA binding interfaces. Ribeiro J; Melo F; Schüller A Bioinformatics; 2015 Aug; 31(16):2751-3. PubMed ID: 25886981 [TBL] [Abstract][Full Text] [Related]
33. A new plug-in software architecture applied for a portable molecular structure browser. Ueno Y; Asai K Proc Int Conf Intell Syst Mol Biol; 1997; 5():329-32. PubMed ID: 9322057 [TBL] [Abstract][Full Text] [Related]
34. Uncovering the structural basis of protein interactions with efficient clustering of 3-D interaction interfaces. Aung Z; Tan SH; Ng SK; Tan KL Comput Syst Bioinformatics Conf; 2007; 6():287-97. PubMed ID: 17951832 [TBL] [Abstract][Full Text] [Related]
36. SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale. Nepusz T; Sasidharan R; Paccanaro A BMC Bioinformatics; 2010 Mar; 11():120. PubMed ID: 20214776 [TBL] [Abstract][Full Text] [Related]
37. Open source clustering software. de Hoon MJ; Imoto S; Nolan J; Miyano S Bioinformatics; 2004 Jun; 20(9):1453-4. PubMed ID: 14871861 [TBL] [Abstract][Full Text] [Related]