These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

210 related articles for article (PubMed ID: 37868056)

  • 1. Predicting protein and pathway associations for understudied dark kinases using pattern-constrained knowledge graph embedding.
    Salcedo MV; Gravel N; Keshavarzi A; Huang LC; Kochut KJ; Kannan N
    PeerJ; 2023; 11():e15815. PubMed ID: 37868056
    [TBL] [Abstract][Full Text] [Related]  

  • 2. KSFinder-a knowledge graph model for link prediction of novel phosphorylated substrates of kinases.
    Anandakrishnan M; Ross KE; Chen C; Shanker V; Cowart J; Wu CH
    PeerJ; 2023; 11():e16164. PubMed ID: 37818330
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A knowledge graph representation learning approach to predict novel kinase-substrate interactions.
    Gavali S; Ross K; Chen C; Cowart J; Wu CH
    Mol Omics; 2022 Oct; 18(9):853-864. PubMed ID: 35975455
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Advancing drug-target interaction prediction: a comprehensive graph-based approach integrating knowledge graph embedding and ProtBert pretraining.
    Djeddi WE; Hermi K; Ben Yahia S; Diallo G
    BMC Bioinformatics; 2023 Dec; 24(1):488. PubMed ID: 38114937
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Illuminate the Functions of Dark Proteins Using the Reactome-IDG Web Portal.
    Beavers D; Brunson T; Sanati N; Matthews L; Haw R; Shorser S; Sevilla C; Viteri G; Conley P; Rothfels K; Hermjakob H; Stein L; D'Eustachio P; Wu G
    Curr Protoc; 2023 Jul; 3(7):e845. PubMed ID: 37467006
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Graph embedding-based link prediction for literature-based discovery in Alzheimer's Disease.
    Pu Y; Beck D; Verspoor K
    J Biomed Inform; 2023 Sep; 145():104464. PubMed ID: 37541406
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Informatic challenges and advances in illuminating the druggable proteome.
    Taujale R; Gravel N; Zhou Z; Yeung W; Kochut K; Kannan N
    Drug Discov Today; 2024 Mar; 29(3):103894. PubMed ID: 38266979
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination.
    Yang JJ; Gessner CR; Duerksen JL; Biber D; Binder JL; Ozturk M; Foote B; McEntire R; Stirling K; Ding Y; Wild DJ
    BMC Bioinformatics; 2022 Jan; 23(1):37. PubMed ID: 35021991
    [TBL] [Abstract][Full Text] [Related]  

  • 9. KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases.
    Huang LC; Taujale R; Gravel N; Venkat A; Yeung W; Byrne DP; Eyers PA; Kannan N
    BMC Bioinformatics; 2021 Sep; 22(1):446. PubMed ID: 34537014
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Multi-domain knowledge graph embeddings for gene-disease association prediction.
    Nunes S; Sousa RT; Pesquita C
    J Biomed Semantics; 2023 Aug; 14(1):11. PubMed ID: 37580835
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Biomedical knowledge graph learning for drug repurposing by extending guilt-by-association to multiple layers.
    Bang D; Lim S; Lee S; Kim S
    Nat Commun; 2023 Jun; 14(1):3570. PubMed ID: 37322032
    [TBL] [Abstract][Full Text] [Related]  

  • 12. BioBLP: a modular framework for learning on multimodal biomedical knowledge graphs.
    Daza D; Alivanistos D; Mitra P; Pijnenburg T; Cochez M; Groth P
    J Biomed Semantics; 2023 Dec; 14(1):20. PubMed ID: 38066573
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Graph embedding on biomedical networks: methods, applications and evaluations.
    Yue X; Wang Z; Huang J; Parthasarathy S; Moosavinasab S; Huang Y; Lin SM; Zhang W; Zhang P; Sun H
    Bioinformatics; 2020 Feb; 36(4):1241-1251. PubMed ID: 31584634
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Drug target ontology to classify and integrate drug discovery data.
    Lin Y; Mehta S; Küçük-McGinty H; Turner JP; Vidovic D; Forlin M; Koleti A; Nguyen DT; Jensen LJ; Guha R; Mathias SL; Ursu O; Stathias V; Duan J; Nabizadeh N; Chung C; Mader C; Visser U; Yang JJ; Bologa CG; Oprea TI; Schürer SC
    J Biomed Semantics; 2017 Nov; 8(1):50. PubMed ID: 29122012
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SumGNN: multi-typed drug interaction prediction via efficient knowledge graph summarization.
    Yu Y; Huang K; Zhang C; Glass LM; Sun J; Xiao C
    Bioinformatics; 2021 Sep; 37(18):2988-2995. PubMed ID: 33769494
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparing methods for drug-gene interaction prediction on the biomedical literature knowledge graph: performance versus explainability.
    Aisopos F; Paliouras G
    BMC Bioinformatics; 2023 Jun; 24(1):272. PubMed ID: 37391722
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Drug repurposing and prediction of multiple interaction types via graph embedding.
    Amiri Souri E; Chenoweth A; Karagiannis SN; Tsoka S
    BMC Bioinformatics; 2023 May; 24(1):202. PubMed ID: 37193964
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of knowledge graph embedding approaches for drug-drug interaction prediction in realistic settings.
    Celebi R; Uyar H; Yasar E; Gumus O; Dikenelli O; Dumontier M
    BMC Bioinformatics; 2019 Dec; 20(1):726. PubMed ID: 31852427
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Biological applications of knowledge graph embedding models.
    Mohamed SK; Nounu A; Nováček V
    Brief Bioinform; 2021 Mar; 22(2):1679-1693. PubMed ID: 32065227
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A novel link prediction algorithm for protein-protein interaction networks by attributed graph embedding.
    Nasiri E; Berahmand K; Rostami M; Dabiri M
    Comput Biol Med; 2021 Oct; 137():104772. PubMed ID: 34450380
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.