These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 37925181)

  • 1. Quantitative base-resolution sequencing technology for mapping pseudouridines in mammalian mRNA.
    Zhang LS; Dai Q; He C
    Methods Enzymol; 2023; 692():23-38. PubMed ID: 37925181
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Quantitative sequencing using BID-seq uncovers abundant pseudouridines in mammalian mRNA at base resolution.
    Dai Q; Zhang LS; Sun HL; Pajdzik K; Yang L; Ye C; Ju CW; Liu S; Wang Y; Zheng Z; Zhang L; Harada BT; Dou X; Irkliyenko I; Feng X; Zhang W; Pan T; He C
    Nat Biotechnol; 2023 Mar; 41(3):344-354. PubMed ID: 36302989
    [TBL] [Abstract][Full Text] [Related]  

  • 3. BID-seq for transcriptome-wide quantitative sequencing of mRNA pseudouridine at base resolution.
    Zhang LS; Ye C; Ju CW; Gao B; Feng X; Sun HL; Wei J; Yang F; Dai Q; He C
    Nat Protoc; 2024 Feb; 19(2):517-538. PubMed ID: 37968414
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Base-Resolution Sequencing Methods for Whole-Transcriptome Quantification of mRNA Modifications.
    Zhang LS; Dai Q; He C
    Acc Chem Res; 2024 Jan; 57(1):47-58. PubMed ID: 38079380
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Bisulfite and Nanopore Sequencing for Pseudouridine in RNA.
    Burrows CJ; Fleming AM
    Acc Chem Res; 2023 Oct; 56(19):2740-2751. PubMed ID: 37700703
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Sensitive and quantitative probing of pseudouridine modification in mRNA and long noncoding RNA.
    Zhang W; Eckwahl MJ; Zhou KI; Pan T
    RNA; 2019 Sep; 25(9):1218-1225. PubMed ID: 31227565
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Transcriptome-wide mapping of pseudouridines: pseudouridine synthases modify specific mRNAs in S. cerevisiae.
    Lovejoy AF; Riordan DP; Brown PO
    PLoS One; 2014; 9(10):e110799. PubMed ID: 25353621
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Quantitative profiling of pseudouridylation landscape in the human transcriptome.
    Zhang M; Jiang Z; Ma Y; Liu W; Zhuang Y; Lu B; Li K; Peng J; Yi C
    Nat Chem Biol; 2023 Oct; 19(10):1185-1195. PubMed ID: 36997645
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Quantifying m
    Zhang M; Xiao Y; Jiang Z; Yi C
    Acc Chem Res; 2023 Nov; 56(21):2980-2991. PubMed ID: 37851547
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pseudouridine Detection and Quantification Using Bisulfite Incorporation Hindered Ligation.
    Zhao Y; Ma X; Ye C; Li W; Pajdzik K; Dai Q; Sun HL; He C
    ACS Chem Biol; 2024 Aug; 19(8):1813-1819. PubMed ID: 39014961
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Pseudouridine site assignment by high-throughput in vitro RNA pseudouridylation and sequencing.
    Martinez NM; Schaening-Burgos C; Gilbert WV
    Methods Enzymol; 2021; 658():277-310. PubMed ID: 34517951
    [TBL] [Abstract][Full Text] [Related]  

  • 12. BID-seq: The Quantitative and Base-Resolution Sequencing Method for RNA Pseudouridine.
    Zhang LS; Dai Q; He C
    ACS Chem Biol; 2023 Jan; 18(1):4-6. PubMed ID: 36525588
    [TBL] [Abstract][Full Text] [Related]  

  • 13. mito-Ψ-Seq: A High-Throughput Method for Systematic Mapping of Pseudouridine Within Mitochondrial RNA.
    Sas-Chen A; Nir R; Schwartz S
    Methods Mol Biol; 2021; 2192():103-115. PubMed ID: 33230769
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Chemical pulldown reveals dynamic pseudouridylation of the mammalian transcriptome.
    Li X; Zhu P; Ma S; Song J; Bai J; Sun F; Yi C
    Nat Chem Biol; 2015 Aug; 11(8):592-7. PubMed ID: 26075521
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Pseudouridine RNA modification detection and quantification by RT-PCR.
    Zhang W; Pan T
    Methods; 2022 Jul; 203():1-4. PubMed ID: 34020036
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Transcriptome-wide analysis of pseudouridylation in Drosophila melanogaster.
    Song W; Podicheti R; Rusch DB; Tracey WD
    G3 (Bethesda); 2023 Mar; 13(3):. PubMed ID: 36534986
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Pseudouridine in mRNA: Incorporation, Detection, and Recoding.
    Wu G; Huang C; Yu YT
    Methods Enzymol; 2015; 560():187-217. PubMed ID: 26253972
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identification of the Saccharomyces cerevisiae RNA:pseudouridine synthase responsible for formation of psi(2819) in 21S mitochondrial ribosomal RNA.
    Ansmant I; Massenet S; Grosjean H; Motorin Y; Branlant C
    Nucleic Acids Res; 2000 May; 28(9):1941-6. PubMed ID: 10756195
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Transcriptome-wide profiling of multiple RNA modifications simultaneously at single-base resolution.
    Khoddami V; Yerra A; Mosbruger TL; Fleming AM; Burrows CJ; Cairns BR
    Proc Natl Acad Sci U S A; 2019 Apr; 116(14):6784-6789. PubMed ID: 30872485
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing.
    Begik O; Lucas MC; Pryszcz LP; Ramirez JM; Medina R; Milenkovic I; Cruciani S; Liu H; Vieira HGS; Sas-Chen A; Mattick JS; Schwartz S; Novoa EM
    Nat Biotechnol; 2021 Oct; 39(10):1278-1291. PubMed ID: 33986546
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.