123 related articles for article (PubMed ID: 37938657)
1. Rbec: a tool for analysis of amplicon sequencing data from synthetic microbial communities.
Zhang P; Spaepen S; Bai Y; Hacquard S; Garrido-Oter R
ISME Commun; 2021 Dec; 1(1):73. PubMed ID: 37938657
[TBL] [Abstract][Full Text] [Related]
2. From Microbial Dynamics to Functionality in the Rhizosphere: A Systematic Review of the Opportunities With Synthetic Microbial Communities.
Marín O; González B; Poupin MJ
Front Plant Sci; 2021; 12():650609. PubMed ID: 34149752
[TBL] [Abstract][Full Text] [Related]
3. Impact of DNA Sequencing and Analysis Methods on 16S rRNA Gene Bacterial Community Analysis of Dairy Products.
Xue Z; Kable ME; Marco ML
mSphere; 2018 Oct; 3(5):. PubMed ID: 30333179
[TBL] [Abstract][Full Text] [Related]
4. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
5. Synthetic microbial communities (SynComs) of the human gut: design, assembly, and applications.
van Leeuwen PT; Brul S; Zhang J; Wortel MT
FEMS Microbiol Rev; 2023 Mar; 47(2):. PubMed ID: 36931888
[TBL] [Abstract][Full Text] [Related]
6. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
[TBL] [Abstract][Full Text] [Related]
7. Different Amplicon Targets for Sequencing-Based Studies of Fungal Diversity.
De Filippis F; Laiola M; Blaiotta G; Ercolini D
Appl Environ Microbiol; 2017 Sep; 83(17):. PubMed ID: 28625991
[TBL] [Abstract][Full Text] [Related]
8. Phylotype-Level Characterization of Complex Communities of Lactobacilli Using a High-Throughput, High-Resolution Phenylalanyl-tRNA Synthetase (
Silvaraju S; Menon N; Fan H; Lim K; Kittelmann S
Appl Environ Microbiol; 2020 Dec; 87(1):. PubMed ID: 33097506
[TBL] [Abstract][Full Text] [Related]
9. The Use of Synthetic Microbial Communities to Improve Plant Health.
Martins SJ; Pasche J; Silva HAO; Selten G; Savastano N; Abreu LM; Bais HP; Garrett KA; Kraisitudomsook N; Pieterse CMJ; Cernava T
Phytopathology; 2023 Aug; 113(8):1369-1379. PubMed ID: 36858028
[TBL] [Abstract][Full Text] [Related]
10. Rapid, Inexpensive Measurement of Synthetic Bacterial Community Composition by Sanger Sequencing of Amplicon Mixtures.
Cermak N; Datta MS; Conwill A
iScience; 2020 Mar; 23(3):100915. PubMed ID: 32114382
[TBL] [Abstract][Full Text] [Related]
11. Daring to be differential: metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units.
Joos L; Beirinckx S; Haegeman A; Debode J; Vandecasteele B; Baeyen S; Goormachtig S; Clement L; De Tender C
BMC Genomics; 2020 Oct; 21(1):733. PubMed ID: 33092529
[TBL] [Abstract][Full Text] [Related]
12. Simple mapping-based quantification of a mock microbial community using total RNA-seq data.
Moriya S
PLoS One; 2021; 16(7):e0254556. PubMed ID: 34270567
[TBL] [Abstract][Full Text] [Related]
13. Promotion of the growth and yield of
De la Vega-Camarillo E; Sotelo-Aguilar J; Rios-Galicia B; Mercado-Flores Y; Arteaga-Garibay R; Villa-Tanaca L; Hernández-Rodríguez C
Front Microbiol; 2023; 14():1167839. PubMed ID: 37275168
[TBL] [Abstract][Full Text] [Related]
14. Performance of Microbiome Sequence Inference Methods in Environments with Varying Biomass.
Caruso V; Song X; Asquith M; Karstens L
mSystems; 2019; 4(1):. PubMed ID: 30801029
[TBL] [Abstract][Full Text] [Related]
15. Ecological patterns of nifH genes in four terrestrial climatic zones explored with targeted metagenomics using FrameBot, a new informatics tool.
Wang Q; Quensen JF; Fish JA; Lee TK; Sun Y; Tiedje JM; Cole JR
mBio; 2013 Sep; 4(5):e00592-13. PubMed ID: 24045641
[TBL] [Abstract][Full Text] [Related]
16. Multi-locus and long amplicon sequencing approach to study microbial diversity at species level using the MinION™ portable nanopore sequencer.
Benítez-Páez A; Sanz Y
Gigascience; 2017 Jul; 6(7):1-12. PubMed ID: 28605506
[TBL] [Abstract][Full Text] [Related]
17. Designing a synthetic microbial community devoted to biological control: The case study of Fusarium wilt of banana.
Prigigallo MI; Gómez-Lama Cabanás C; Mercado-Blanco J; Bubici G
Front Microbiol; 2022; 13():967885. PubMed ID: 35992653
[No Abstract] [Full Text] [Related]
18. Reproducibility and quantitation of amplicon sequencing-based detection.
Zhou J; Wu L; Deng Y; Zhi X; Jiang YH; Tu Q; Xie J; Van Nostrand JD; He Z; Yang Y
ISME J; 2011 Aug; 5(8):1303-13. PubMed ID: 21346791
[TBL] [Abstract][Full Text] [Related]
19. Controlling for Contaminants in Low-Biomass 16S rRNA Gene Sequencing Experiments.
Karstens L; Asquith M; Davin S; Fair D; Gregory WT; Wolfe AJ; Braun J; McWeeney S
mSystems; 2019 Jun; 4(4):. PubMed ID: 31164452
[TBL] [Abstract][Full Text] [Related]
20. Bacterial and Eukaryotic Small-Subunit Amplicon Data Do Not Provide a Quantitative Picture of Microbial Communities, but They Are Reliable in the Context of Ecological Interpretations.
Piwosz K; Shabarova T; Pernthaler J; Posch T; Šimek K; Porcal P; Salcher MM
mSphere; 2020 Mar; 5(2):. PubMed ID: 32132159
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]