These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
127 related articles for article (PubMed ID: 37961708)
21. How local reference panels improve imputation in French populations. Herzig AF; Velo-Suárez L; ; ; Dina C; Redon R; Deleuze JF; Génin E Sci Rep; 2024 Jan; 14(1):370. PubMed ID: 38172507 [TBL] [Abstract][Full Text] [Related]
22. Genotype imputation and reference panel: a systematic evaluation on haplotype size and diversity. Bai WY; Zhu XW; Cong PK; Zhang XJ; Richards JB; Zheng HF Brief Bioinform; 2019 Nov; ():. PubMed ID: 32002535 [TBL] [Abstract][Full Text] [Related]
23. Comparison of genotype imputation strategies using a combined reference panel for chicken population. Ye S; Yuan X; Huang S; Zhang H; Chen Z; Li J; Zhang X; Zhang Z Animal; 2019 Jun; 13(6):1119-1126. PubMed ID: 30370890 [TBL] [Abstract][Full Text] [Related]
24. Inclusion of Population-specific Reference Panel from India to the 1000 Genomes Phase 3 Panel Improves Imputation Accuracy. Ahmad M; Sinha A; Ghosh S; Kumar V; Davila S; Yajnik CS; Chandak GR Sci Rep; 2017 Jul; 7(1):6733. PubMed ID: 28751670 [TBL] [Abstract][Full Text] [Related]
25. Effects of reduced panel, reference origin, and genetic relationship on imputation of genotypes in Hereford cattle. Huang Y; Maltecca C; Cassady JP; Alexander LJ; Snelling WM; MacNeil MD J Anim Sci; 2012 Dec; 90(12):4203-8. PubMed ID: 22859753 [TBL] [Abstract][Full Text] [Related]
26. A combined reference panel from the 1000 Genomes and UK10K projects improved rare variant imputation in European and Chinese samples. Chou WC; Zheng HF; Cheng CH; Yan H; Wang L; Han F; Richards JB; Karasik D; Kiel DP; Hsu YH Sci Rep; 2016 Dec; 6():39313. PubMed ID: 28004816 [TBL] [Abstract][Full Text] [Related]
27. Performance and accuracy evaluation of reference panels for genotype imputation in sub-Saharan African populations. Sengupta D; Botha G; Meintjes A; Mbiyavanga M; ; ; Hazelhurst S; Mulder N; Ramsay M; Choudhury A Cell Genom; 2023 Jun; 3(6):100332. PubMed ID: 37388906 [TBL] [Abstract][Full Text] [Related]
28. Evaluation of developed low-density genotype panels for imputation to higher density in independent dairy and beef cattle populations. Judge MM; Kearney JF; McClure MC; Sleator RD; Berry DP J Anim Sci; 2016 Mar; 94(3):949-62. PubMed ID: 27065257 [TBL] [Abstract][Full Text] [Related]
29. Accuracy of imputation using the most common sires as reference population in layer chickens. Heidaritabar M; Calus MP; Vereijken A; Groenen MA; Bastiaansen JW BMC Genet; 2015 Aug; 16():101. PubMed ID: 26282557 [TBL] [Abstract][Full Text] [Related]
30. Effect of genome-wide genotyping and reference panels on rare variants imputation. Zheng HF; Ladouceur M; Greenwood CM; Richards JB J Genet Genomics; 2012 Oct; 39(10):545-50. PubMed ID: 23089364 [TBL] [Abstract][Full Text] [Related]
31. Improving accuracy of rare variant imputation with a two-step imputation approach. Kreiner-Møller E; Medina-Gomez C; Uitterlinden AG; Rivadeneira F; Estrada K Eur J Hum Genet; 2015 Mar; 23(3):395-400. PubMed ID: 24939589 [TBL] [Abstract][Full Text] [Related]
32. High imputation accuracy from informative low-to-medium density single nucleotide polymorphism genotypes is achievable in sheep1. O'Brien AC; Judge MM; Fair S; Berry DP J Anim Sci; 2019 Apr; 97(4):1550-1567. PubMed ID: 30722011 [TBL] [Abstract][Full Text] [Related]
33. Genotype imputation from various low-density SNP panels and its impact on accuracy of genomic breeding values in pigs. Grossi DA; Brito LF; Jafarikia M; Schenkel FS; Feng Z Animal; 2018 Nov; 12(11):2235-2245. PubMed ID: 29706144 [TBL] [Abstract][Full Text] [Related]
34. Genotype imputation of Metabochip SNPs using a study-specific reference panel of ~4,000 haplotypes in African Americans from the Women's Health Initiative. Liu EY; Buyske S; Aragaki AK; Peters U; Boerwinkle E; Carlson C; Carty C; Crawford DC; Haessler J; Hindorff LA; Marchand LL; Manolio TA; Matise T; Wang W; Kooperberg C; North KE; Li Y Genet Epidemiol; 2012 Feb; 36(2):107-17. PubMed ID: 22851474 [TBL] [Abstract][Full Text] [Related]
35. Improved imputation accuracy in Hispanic/Latino populations with larger and more diverse reference panels: applications in the Hispanic Community Health Study/Study of Latinos (HCHS/SOL). Nelson SC; Stilp AM; Papanicolaou GJ; Taylor KD; Rotter JI; Thornton TA; Laurie CC Hum Mol Genet; 2016 Aug; 25(15):3245-3254. PubMed ID: 27346520 [TBL] [Abstract][Full Text] [Related]
36. Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy. Bouwman AC; Veerkamp RF BMC Genet; 2014 Oct; 15():105. PubMed ID: 25277486 [TBL] [Abstract][Full Text] [Related]
37. Performance of genotype imputation for rare variants identified in exons and flanking regions of genes. Li L; Li Y; Browning SR; Browning BL; Slater AJ; Kong X; Aponte JL; Mooser VE; Chissoe SL; Whittaker JC; Nelson MR; Ehm MG PLoS One; 2011; 6(9):e24945. PubMed ID: 21949800 [TBL] [Abstract][Full Text] [Related]
38. Comparison of HapMap and 1000 Genomes Reference Panels in a Large-Scale Genome-Wide Association Study. de Vries PS; Sabater-Lleal M; Chasman DI; Trompet S; Ahluwalia TS; Teumer A; Kleber ME; Chen MH; Wang JJ; Attia JR; Marioni RE; Steri M; Weng LC; Pool R; Grossmann V; Brody JA; Venturini C; Tanaka T; Rose LM; Oldmeadow C; Mazur J; Basu S; Frånberg M; Yang Q; Ligthart S; Hottenga JJ; Rumley A; Mulas A; de Craen AJ; Grotevendt A; Taylor KD; Delgado GE; Kifley A; Lopez LM; Berentzen TL; Mangino M; Bandinelli S; Morrison AC; Hamsten A; Tofler G; de Maat MP; Draisma HH; Lowe GD; Zoledziewska M; Sattar N; Lackner KJ; Völker U; McKnight B; Huang J; Holliday EG; McEvoy MA; Starr JM; Hysi PG; Hernandez DG; Guan W; Rivadeneira F; McArdle WL; Slagboom PE; Zeller T; Psaty BM; Uitterlinden AG; de Geus EJ; Stott DJ; Binder H; Hofman A; Franco OH; Rotter JI; Ferrucci L; Spector TD; Deary IJ; März W; Greinacher A; Wild PS; Cucca F; Boomsma DI; Watkins H; Tang W; Ridker PM; Jukema JW; Scott RJ; Mitchell P; Hansen T; O'Donnell CJ; Smith NL; Strachan DP; Dehghan A PLoS One; 2017; 12(1):e0167742. PubMed ID: 28107422 [TBL] [Abstract][Full Text] [Related]
39. Improving imputation in disease-relevant regions: lessons from cystic fibrosis. Panjwani N; Xiao B; Xu L; Gong J; Keenan K; Lin F; He G; Baskurt Z; Kim S; Zhang L; Esmaeili M; Blackman S; Scherer SW; Corvol H; Drumm M; Knowles M; Cutting G; Rommens JM; Sun L; Strug LJ NPJ Genom Med; 2018; 3():8. PubMed ID: 29581887 [TBL] [Abstract][Full Text] [Related]
40. Evaluation of low-density SNP panels and imputation for cost-effective genomic selection in four aquaculture species. Kriaridou C; Tsairidou S; Fraslin C; Gorjanc G; Looseley ME; Johnston IA; Houston RD; Robledo D Front Genet; 2023; 14():1194266. PubMed ID: 37252666 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]