170 related articles for article (PubMed ID: 37983381)
1. From Proteins to Ligands: Decoding Deep Learning Methods for Binding Affinity Prediction.
Gorantla R; Kubincová A; Weiße AY; Mey ASJS
J Chem Inf Model; 2024 Apr; 64(7):2496-2507. PubMed ID: 37983381
[TBL] [Abstract][Full Text] [Related]
2. A New Hybrid Neural Network Deep Learning Method for Protein-Ligand Binding Affinity Prediction and De Novo Drug Design.
Limbu S; Dakshanamurthy S
Int J Mol Sci; 2022 Nov; 23(22):. PubMed ID: 36430386
[TBL] [Abstract][Full Text] [Related]
3. AK-Score: Accurate Protein-Ligand Binding Affinity Prediction Using an Ensemble of 3D-Convolutional Neural Networks.
Kwon Y; Shin WH; Ko J; Lee J
Int J Mol Sci; 2020 Nov; 21(22):. PubMed ID: 33182567
[TBL] [Abstract][Full Text] [Related]
4. Development of a graph convolutional neural network model for efficient prediction of protein-ligand binding affinities.
Son J; Kim D
PLoS One; 2021; 16(4):e0249404. PubMed ID: 33831016
[TBL] [Abstract][Full Text] [Related]
5. Deep neural network affinity model for BACE inhibitors in D3R Grand Challenge 4.
Wang B; Ng HL
J Comput Aided Mol Des; 2020 Feb; 34(2):201-217. PubMed ID: 31916049
[TBL] [Abstract][Full Text] [Related]
6. ResBiGAAT: Residual Bi-GRU with attention for protein-ligand binding affinity prediction.
Aly Abdelkader G; Ngnamsie Njimbouom S; Oh TJ; Kim JD
Comput Biol Chem; 2023 Dec; 107():107969. PubMed ID: 37866117
[TBL] [Abstract][Full Text] [Related]
7. DLSSAffinity: protein-ligand binding affinity prediction
Wang H; Liu H; Ning S; Zeng C; Zhao Y
Phys Chem Chem Phys; 2022 May; 24(17):10124-10133. PubMed ID: 35416807
[TBL] [Abstract][Full Text] [Related]
8. K
Jiménez J; Škalič M; Martínez-Rosell G; De Fabritiis G
J Chem Inf Model; 2018 Feb; 58(2):287-296. PubMed ID: 29309725
[TBL] [Abstract][Full Text] [Related]
9. GraphscoreDTA: optimized graph neural network for protein-ligand binding affinity prediction.
Wang K; Zhou R; Tang J; Li M
Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37225408
[TBL] [Abstract][Full Text] [Related]
10. PLANET: A Multi-objective Graph Neural Network Model for Protein-Ligand Binding Affinity Prediction.
Zhang X; Gao H; Wang H; Chen Z; Zhang Z; Chen X; Li Y; Qi Y; Wang R
J Chem Inf Model; 2024 Apr; 64(7):2205-2220. PubMed ID: 37319418
[TBL] [Abstract][Full Text] [Related]
11. Leveraging scaffold information to predict protein-ligand binding affinity with an empirical graph neural network.
Xia C; Feng SH; Xia Y; Pan X; Shen HB
Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36627113
[TBL] [Abstract][Full Text] [Related]
12. HAC-Net: A Hybrid Attention-Based Convolutional Neural Network for Highly Accurate Protein-Ligand Binding Affinity Prediction.
Kyro GW; Brent RI; Batista VS
J Chem Inf Model; 2023 Apr; 63(7):1947-1960. PubMed ID: 36988912
[TBL] [Abstract][Full Text] [Related]
13. Combining Docking Pose Rank and Structure with Deep Learning Improves Protein-Ligand Binding Mode Prediction over a Baseline Docking Approach.
Morrone JA; Weber JK; Huynh T; Luo H; Cornell WD
J Chem Inf Model; 2020 Sep; 60(9):4170-4179. PubMed ID: 32077698
[TBL] [Abstract][Full Text] [Related]
14. Improved Protein-Ligand Binding Affinity Prediction with Structure-Based Deep Fusion Inference.
Jones D; Kim H; Zhang X; Zemla A; Stevenson G; Bennett WFD; Kirshner D; Wong SE; Lightstone FC; Allen JE
J Chem Inf Model; 2021 Apr; 61(4):1583-1592. PubMed ID: 33754707
[TBL] [Abstract][Full Text] [Related]
15. A Cascade Graph Convolutional Network for Predicting Protein-Ligand Binding Affinity.
Shen H; Zhang Y; Zheng C; Wang B; Chen P
Int J Mol Sci; 2021 Apr; 22(8):. PubMed ID: 33919681
[TBL] [Abstract][Full Text] [Related]
16. Ligand binding affinity prediction with fusion of graph neural networks and 3D structure-based complex graph.
Dong L; Shi S; Qu X; Luo D; Wang B
Phys Chem Chem Phys; 2023 Sep; 25(35):24110-24120. PubMed ID: 37655493
[TBL] [Abstract][Full Text] [Related]
17. Visualizing convolutional neural network protein-ligand scoring.
Hochuli J; Helbling A; Skaist T; Ragoza M; Koes DR
J Mol Graph Model; 2018 Sep; 84():96-108. PubMed ID: 29940506
[TBL] [Abstract][Full Text] [Related]
18. Predicting protein-ligand binding residues with deep convolutional neural networks.
Cui Y; Dong Q; Hong D; Wang X
BMC Bioinformatics; 2019 Feb; 20(1):93. PubMed ID: 30808287
[TBL] [Abstract][Full Text] [Related]
19. graphLambda: Fusion Graph Neural Networks for Binding Affinity Prediction.
Mqawass G; Popov P
J Chem Inf Model; 2024 Apr; 64(7):2323-2330. PubMed ID: 38366974
[TBL] [Abstract][Full Text] [Related]
20. Effects of data quality and quantity on deep learning for protein-ligand binding affinity prediction.
Fan FJ; Shi Y
Bioorg Med Chem; 2022 Oct; 72():117003. PubMed ID: 36103795
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]