BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 37991880)

  • 1. Evaluating DFHBI-Responsive RNA Light-Up Aptamers as Fluorescent Reporters for Gene Expression.
    Climent-Catala A; Casas-Rodrigo I; Iyer S; Ledesma-Amaro R; Ouldridge TE
    ACS Synth Biol; 2023 Dec; 12(12):3754-3765. PubMed ID: 37991880
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Light-up and FRET aptamer reporters; evaluating their applications for imaging transcription in eukaryotic cells.
    Ilgu M; Ray J; Bendickson L; Wang T; Geraskin IM; Kraus GA; Nilsen-Hamilton M
    Methods; 2016 Apr; 98():26-33. PubMed ID: 26707205
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Broccoli: rapid selection of an RNA mimic of green fluorescent protein by fluorescence-based selection and directed evolution.
    Filonov GS; Moon JD; Svensen N; Jaffrey SR
    J Am Chem Soc; 2014 Nov; 136(46):16299-308. PubMed ID: 25337688
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Use of Baby Spinach and Broccoli for imaging of structured cellular RNAs.
    Okuda M; Fourmy D; Yoshizawa S
    Nucleic Acids Res; 2017 Feb; 45(3):1404-1415. PubMed ID: 28180326
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The spinach RNA aptamer as a characterization tool for synthetic biology.
    Pothoulakis G; Ceroni F; Reeve B; Ellis T
    ACS Synth Biol; 2014 Mar; 3(3):182-7. PubMed ID: 23991760
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Broccoli Fluorets: Split Aptamers as a User-Friendly Fluorescent Toolkit for Dynamic RNA Nanotechnology.
    Chandler M; Lyalina T; Halman J; Rackley L; Lee L; Dang D; Ke W; Sajja S; Woods S; Acharya S; Baumgarten E; Christopher J; Elshalia E; Hrebien G; Kublank K; Saleh S; Stallings B; Tafere M; Striplin C; Afonin KA
    Molecules; 2018 Dec; 23(12):. PubMed ID: 30513826
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Rapid Selection of RNA Aptamers that Activate Fluorescence of Small Molecules.
    Filonov GS
    Methods Mol Biol; 2017; 1575():273-289. PubMed ID: 28255887
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Fluorophore-Promoted RNA Folding and Photostability Enables Imaging of Single Broccoli-Tagged mRNAs in Live Mammalian Cells.
    Li X; Kim H; Litke JL; Wu J; Jaffrey SR
    Angew Chem Int Ed Engl; 2020 Mar; 59(11):4511-4518. PubMed ID: 31850609
    [TBL] [Abstract][Full Text] [Related]  

  • 9. FRET Analysis of RNA -Protein Interactions Using Spinach Aptamers.
    Gerhard L; Hennig S
    Methods Mol Biol; 2021; 2323():171-197. PubMed ID: 34086281
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Live imaging of mRNA using RNA-stabilized fluorogenic proteins.
    Wu J; Zaccara S; Khuperkar D; Kim H; Tanenbaum ME; Jaffrey SR
    Nat Methods; 2019 Sep; 16(9):862-865. PubMed ID: 31471614
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Live Cell Imaging Using Riboswitch-Spinach tRNA Fusions as Metabolite-Sensing Fluorescent Biosensors.
    Manna S; Kellenberger CA; Hallberg ZF; Hammond MC
    Methods Mol Biol; 2021; 2323():121-140. PubMed ID: 34086278
    [TBL] [Abstract][Full Text] [Related]  

  • 12. mRNA imaging in the chloroplast of Chlamydomonas reinhardtii using the light-up aptamer Spinach.
    Guzmán-Zapata D; Domínguez-Anaya Y; Macedo-Osorio KS; Tovar-Aguilar A; Castrejón-Flores JL; Durán-Figueroa NV; Badillo-Corona JA
    J Biotechnol; 2017 Jun; 251():186-188. PubMed ID: 28359866
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Determination of In Vitro and Cellular Turn-on Kinetics for Fluorogenic RNA Aptamers.
    Mumbleau MM; Meyer MR; Hammond MC
    J Vis Exp; 2022 Aug; (186):. PubMed ID: 36036622
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Building an RNA-Based Toggle Switch Using Inhibitory RNA Aptamers.
    Climent-Catala A; Ouldridge TE; Stan GV; Bae W
    ACS Synth Biol; 2022 Feb; 11(2):562-569. PubMed ID: 35133150
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Spectral Tuning by a Single Nucleotide Controls the Fluorescence Properties of a Fluorogenic Aptamer.
    Filonov GS; Song W; Jaffrey SR
    Biochemistry; 2019 Mar; 58(12):1560-1564. PubMed ID: 30838859
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Imaging Intracellular
    Li X; Mo L; Litke JL; Dey SK; Suter SR; Jaffrey SR
    J Am Chem Soc; 2020 Aug; 142(33):14117-14124. PubMed ID: 32698574
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Optimized Assembly of a Multifunctional RNA-Protein Nanostructure in a Cell-Free Gene Expression System.
    Schwarz-Schilling M; Dupin A; Chizzolini F; Krishnan S; Mansy SS; Simmel FC
    Nano Lett; 2018 Apr; 18(4):2650-2657. PubMed ID: 29564885
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Live-cell imaging of small nucleolar RNA tagged with the broccoli aptamer in yeast.
    Zinskie JA; Roig M; Janetopoulos C; Myers KA; Bruist MF
    FEMS Yeast Res; 2018 Dec; 18(8):. PubMed ID: 30137288
    [TBL] [Abstract][Full Text] [Related]  

  • 19. In-gel imaging of RNA processing using broccoli reveals optimal aptamer expression strategies.
    Filonov GS; Kam CW; Song W; Jaffrey SR
    Chem Biol; 2015 May; 22(5):649-60. PubMed ID: 26000751
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Development of a genetically encodable FRET system using fluorescent RNA aptamers.
    Jepsen MDE; Sparvath SM; Nielsen TB; Langvad AH; Grossi G; Gothelf KV; Andersen ES
    Nat Commun; 2018 Jan; 9(1):18. PubMed ID: 29295996
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.