These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
169 related articles for article (PubMed ID: 38041071)
1. HostNet: improved sequence representation in deep neural networks for virus-host prediction. Ming Z; Chen X; Wang S; Liu H; Yuan Z; Wu M; Xia H BMC Bioinformatics; 2023 Dec; 24(1):455. PubMed ID: 38041071 [TBL] [Abstract][Full Text] [Related]
2. VIDHOP, viral host prediction with deep learning. Mock F; Viehweger A; Barth E; Marz M Bioinformatics; 2021 Apr; 37(3):318-325. PubMed ID: 32777818 [TBL] [Abstract][Full Text] [Related]
3. Prediction of viral families and hosts of single-stranded RNA viruses based on K-Mer coding from phylogenetic gene sequences. Çi Ftçi B; Teki N R Comput Biol Chem; 2024 May; 112():108114. PubMed ID: 38852362 [TBL] [Abstract][Full Text] [Related]
4. Zero-shot-capable identification of phage-host relationships with whole-genome sequence representation by contrastive learning. Zhang YZ; Liu Y; Bai Z; Fujimoto K; Uematsu S; Imoto S Brief Bioinform; 2023 Sep; 24(5):. PubMed ID: 37466138 [TBL] [Abstract][Full Text] [Related]
5. Predicting host taxonomic information from viral genomes: A comparison of feature representations. Young F; Rogers S; Robertson DL PLoS Comput Biol; 2020 May; 16(5):e1007894. PubMed ID: 32453718 [TBL] [Abstract][Full Text] [Related]
6. Prediction of virus-host infectious association by supervised learning methods. Zhang M; Yang L; Ren J; Ahlgren NA; Fuhrman JA; Sun F BMC Bioinformatics; 2017 Mar; 18(Suppl 3):60. PubMed ID: 28361670 [TBL] [Abstract][Full Text] [Related]
7. Toward an Alignment-Free Method for Feature Extraction and Accurate Classification of Viral Sequences. Lebatteux D; Remita AM; Diallo AB J Comput Biol; 2019 Jun; 26(6):519-535. PubMed ID: 31050550 [No Abstract] [Full Text] [Related]
8. Prokaryotic virus host predictor: a Gaussian model for host prediction of prokaryotic viruses in metagenomics. Lu C; Zhang Z; Cai Z; Zhu Z; Qiu Y; Wu A; Jiang T; Zheng H; Peng Y BMC Biol; 2021 Jan; 19(1):5. PubMed ID: 33441133 [TBL] [Abstract][Full Text] [Related]
9. Predicting the hosts of prokaryotic viruses using GCN-based semi-supervised learning. Shang J; Sun Y BMC Biol; 2021 Nov; 19(1):250. PubMed ID: 34819064 [TBL] [Abstract][Full Text] [Related]
10. DeepD2V: A Novel Deep Learning-Based Framework for Predicting Transcription Factor Binding Sites from Combined DNA Sequence. Deng L; Wu H; Liu X; Liu H Int J Mol Sci; 2021 May; 22(11):. PubMed ID: 34073774 [TBL] [Abstract][Full Text] [Related]
11. CNN-Siam: multimodal siamese CNN-based deep learning approach for drug‒drug interaction prediction. Yang Z; Tong K; Jin S; Wang S; Yang C; Jiang F BMC Bioinformatics; 2023 Mar; 24(1):110. PubMed ID: 36959539 [TBL] [Abstract][Full Text] [Related]
12. A CNN-CBAM-BIGRU model for protein function prediction. Sharma L; Deepak A; Ranjan A; Krishnasamy G Stat Appl Genet Mol Biol; 2024 Jan; 23(1):. PubMed ID: 38943434 [TBL] [Abstract][Full Text] [Related]
13. Novel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains. Iwasaki Y; Abe T; Wada Y; Wada K; Ikemura T BMC Infect Dis; 2013 Aug; 13():386. PubMed ID: 23964903 [TBL] [Abstract][Full Text] [Related]
14. Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction. Mollentze N; Keen D; Munkhbayar U; Biek R; Streicker DG Elife; 2022 Nov; 11():. PubMed ID: 36416537 [TBL] [Abstract][Full Text] [Related]
16. Misclassified: identification of zoonotic transition biomarker candidates for influenza A viruses using deep neural network. Hatibi N; Dumont-Lagacé M; Alouani Z; El Fatimy R; Abik M; Daouda T Front Genet; 2023; 14():1145166. PubMed ID: 37576548 [No Abstract] [Full Text] [Related]
17. Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding. Min X; Zeng W; Chen N; Chen T; Jiang R Bioinformatics; 2017 Jul; 33(14):i92-i101. PubMed ID: 28881969 [TBL] [Abstract][Full Text] [Related]
18. A Deep Learning Approach for Predicting Antigenic Variation of Influenza A H3N2. Xia YL; Li W; Li Y; Ji XL; Fu YX; Liu SQ Comput Math Methods Med; 2021; 2021():9997669. PubMed ID: 34697557 [TBL] [Abstract][Full Text] [Related]
19. Deep neural networks for human microRNA precursor detection. Zheng X; Fu X; Wang K; Wang M BMC Bioinformatics; 2020 Jan; 21(1):17. PubMed ID: 31931701 [TBL] [Abstract][Full Text] [Related]
20. HN-PPISP: a hybrid network based on MLP-Mixer for protein-protein interaction site prediction. Kang Y; Xu Y; Wang X; Pu B; Yang X; Rao Y; Chen J Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36403092 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]