BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

117 related articles for article (PubMed ID: 38042496)

  • 1. Accurate Detection of Multiple Tumor Mutations in Formalin-Fixed Paraffin-Embedded Tissues by Coupling Sequence Artifacts Elimination and Mutation Enrichment With MeltArray.
    Lan Y; Xu B; Xi Y; Luo Y; Guo X; Huang Z; Luo D; Zhu A; He P; Li C; Huang Q; Li Q
    Lab Invest; 2024 Feb; 104(2):100300. PubMed ID: 38042496
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PIK3CA mutation is a favorable prognostic factor in esophageal cancer: molecular profile by next-generation sequencing using surgically resected formalin-fixed, paraffin-embedded tissue.
    Yokota T; Serizawa M; Hosokawa A; Kusafuka K; Mori K; Sugiyama T; Tsubosa Y; Koh Y
    BMC Cancer; 2018 Aug; 18(1):826. PubMed ID: 30115035
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Targeted capture-based NGS is superior to multiplex PCR-based NGS for hereditary BRCA1 and BRCA2 gene analysis in FFPE tumor samples.
    Zakrzewski F; Gieldon L; Rump A; Seifert M; Grützmann K; Krüger A; Loos S; Zeugner S; Hackmann K; Porrmann J; Wagner J; Kast K; Wimberger P; Baretton G; Schröck E; Aust D; Klink B
    BMC Cancer; 2019 Apr; 19(1):396. PubMed ID: 31029168
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Profiling cancer gene mutations in clinical formalin-fixed, paraffin-embedded colorectal tumor specimens using targeted next-generation sequencing.
    Zhang L; Chen L; Sah S; Latham GJ; Patel R; Song Q; Koeppen H; Tam R; Schleifman E; Mashhedi H; Chalasani S; Fu L; Sumiyoshi T; Raja R; Forrest W; Hampton GM; Lackner MR; Hegde P; Jia S
    Oncologist; 2014 Apr; 19(4):336-43. PubMed ID: 24664487
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Reducing sequence artifacts in amplicon-based massively parallel sequencing of formalin-fixed paraffin-embedded DNA by enzymatic depletion of uracil-containing templates.
    Do H; Wong SQ; Li J; Dobrovic A
    Clin Chem; 2013 Sep; 59(9):1376-83. PubMed ID: 23649127
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Analytical Performance of Next-Generation Sequencing and RT-PCR on Formalin-Fixed Paraffin-Embedded Tumor Tissues for
    Venetis K; Pepe F; Munzone E; Sajjadi E; Russo G; Pisapia P; Ivanova M; Bonizzi G; Vacirca D; Rappa A; Ranghiero A; Taormina SV; Viale G; Troncone G; Barberis M; Guerini-Rocco E; Malapelle U; Fusco N
    Cells; 2022 Nov; 11(22):. PubMed ID: 36428975
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of Three Real-Time PCR Assays for the Detection of PIK3CA Somatic Mutations in Formalin-Fixed Paraffin Embedded Tissues of Patients with Breast Carcinomas.
    Lambert A; Salleron J; Lion M; Rouyer M; Lozano N; Leroux A; Merlin JL; Harlé A
    Pathol Oncol Res; 2019 Jul; 25(3):1117-1123. PubMed ID: 30426328
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Validation of a Multiplex Allele-Specific Polymerase Chain Reaction Assay for Detection of KRAS Gene Mutations in Formalin-Fixed, Paraffin-Embedded Tissues from Colorectal Cancer Patients.
    Seekhuntod S; Thavarungkul P; Chaichanawongsaroj N
    PLoS One; 2016; 11(1):e0147672. PubMed ID: 26812617
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Quick-multiplex-consensus (QMC)-PCR followed by high-resolution melting: a simple and robust method for mutation detection in formalin-fixed paraffin-embedded tissue.
    Fadhil W; Ibrahem S; Seth R; Ilyas M
    J Clin Pathol; 2010 Feb; 63(2):134-40. PubMed ID: 20154035
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Non-reproducible sequence artifacts in FFPE tissue: an experience report.
    Ofner R; Ritter C; Ugurel S; Cerroni L; Stiller M; Bogenrieder T; Solca F; Schrama D; Becker JC
    J Cancer Res Clin Oncol; 2017 Jul; 143(7):1199-1207. PubMed ID: 28314930
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel fully automated molecular diagnostic system (AMDS) for colorectal cancer mutation detection.
    Kitano S; Myers J; Nakamura J; Yamane A; Yamashita M; Nakayama M; Tsukahara Y; Ushida H; Liu W; Ratain MJ; Amano M
    PLoS One; 2013; 8(5):e62989. PubMed ID: 23671647
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DEEPOMICS FFPE, a deep neural network model, identifies DNA sequencing artifacts from formalin fixed paraffin embedded tissue with high accuracy.
    Heo DH; Kim I; Seo H; Kim SG; Kim M; Park J; Park H; Kang S; Kim J; Paik S; Hong SE
    Sci Rep; 2024 Jan; 14(1):2559. PubMed ID: 38297116
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Dramatic reduction of sequence artefacts from DNA isolated from formalin-fixed cancer biopsies by treatment with uracil- DNA glycosylase.
    Do H; Dobrovic A
    Oncotarget; 2012 May; 3(5):546-58. PubMed ID: 22643842
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Sequence artifacts in DNA from formalin-fixed tissues: causes and strategies for minimization.
    Do H; Dobrovic A
    Clin Chem; 2015 Jan; 61(1):64-71. PubMed ID: 25421801
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Reducing Artifactual
    Do H; Molania R; Mitchell PL; Vaiskunaite R; Murdoch JD; Dobrovic A
    Clin Chem; 2017 Sep; 63(9):1506-1514. PubMed ID: 28720682
    [TBL] [Abstract][Full Text] [Related]  

  • 16. HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples.
    Moens LN; Falk-Sörqvist E; Ljungström V; Mattsson J; Sundström M; La Fleur L; Mathot L; Micke P; Nilsson M; Botling J
    J Mol Diagn; 2015 Nov; 17(6):729-39. PubMed ID: 26354930
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Frequency of KRAS, BRAF, and PIK3CA mutations in advanced colorectal cancers: Comparison of peptide nucleic acid-mediated PCR clamping and direct sequencing in formalin-fixed, paraffin-embedded tissue.
    Kwon MJ; Lee SE; Kang SY; Choi YL
    Pathol Res Pract; 2011 Dec; 207(12):762-8. PubMed ID: 22070922
    [TBL] [Abstract][Full Text] [Related]  

  • 18. [Comparison of different massive parallel sequencing platforms for mutation profiling in formalin-fixed and paraffin-embedded samples].
    Jiang RR; Wang YJ; Teng XD; Xiao L; Bu H; Ye F
    Zhonghua Bing Li Xue Za Zhi; 2018 Aug; 47(8):591-596. PubMed ID: 30107663
    [No Abstract]   [Full Text] [Related]  

  • 19. Using postmortem formalin fixed paraffin-embedded tissues for molecular testing of sudden cardiac death: A cautionary tale of utility and limitations.
    Lin Y; Gryazeva T; Wang D; Zhou B; Um SY; Eng LS; Ruiter K; Rojas L; Williams N; Sampson BA; Tang Y
    Forensic Sci Int; 2020 Mar; 308():110177. PubMed ID: 32155531
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The efficacy of uracil DNA glycosylase pretreatment in amplicon-based massively parallel sequencing with DNA extracted from archived formalin-fixed paraffin-embedded esophageal cancer tissues.
    Serizawa M; Yokota T; Hosokawa A; Kusafuka K; Sugiyama T; Tsubosa Y; Yasui H; Nakajima T; Koh Y
    Cancer Genet; 2015 Sep; 208(9):415-27. PubMed ID: 26194062
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.