220 related articles for article (PubMed ID: 38049728)
1. Molecular bases for strong phenotypic effects of single synonymous codon substitutions in the E. coli ccdB toxin gene.
Bajaj P; Bhasin M; Varadarajan R
BMC Genomics; 2023 Dec; 24(1):732. PubMed ID: 38049728
[TBL] [Abstract][Full Text] [Related]
2. The High Mutational Sensitivity of ccdA Antitoxin Is Linked to Codon Optimality.
Chandra S; Gupta K; Khare S; Kohli P; Asok A; Mohan SV; Gowda H; Varadarajan R
Mol Biol Evol; 2022 Oct; 39(10):. PubMed ID: 36069948
[TBL] [Abstract][Full Text] [Related]
3. Synonymous codon substitutions perturb cotranslational protein folding in vivo and impair cell fitness.
Walsh IM; Bowman MA; Soto Santarriaga IF; Rodriguez A; Clark PL
Proc Natl Acad Sci U S A; 2020 Feb; 117(7):3528-3534. PubMed ID: 32015130
[TBL] [Abstract][Full Text] [Related]
4. Structural and functional determinants inferred from deep mutational scans.
Bajaj P; Manjunath K; Varadarajan R
Protein Sci; 2022 Jul; 31(7):e4357. PubMed ID: 35762712
[TBL] [Abstract][Full Text] [Related]
5. Mutations to Less-Preferred Synonymous Codons in a Highly Expressed Gene of Escherichia coli: Fitness and Epistatic Interactions.
Hauber DJ; Grogan DW; DeBry RW
PLoS One; 2016; 11(1):e0146375. PubMed ID: 26727272
[TBL] [Abstract][Full Text] [Related]
6. The fitness consequences of synonymous mutations in Escherichia coli: Experimental evidence for a pleiotropic effect of translational selection.
Ballard A; Bieniek S; Carlini DB
Gene; 2019 Apr; 694():111-120. PubMed ID: 30738968
[TBL] [Abstract][Full Text] [Related]
7. Enhancing functional expression of codon-optimized heterologous enzymes in Escherichia coli BL21(DE3) by selective introduction of synonymous rare codons.
Zhong C; Wei P; Zhang YP
Biotechnol Bioeng; 2017 May; 114(5):1054-1064. PubMed ID: 27943233
[TBL] [Abstract][Full Text] [Related]
8. Bicodon bias can determine the role of synonymous SNPs in human diseases.
McCarthy C; Carrea A; Diambra L
BMC Genomics; 2017 Mar; 18(1):227. PubMed ID: 28288557
[TBL] [Abstract][Full Text] [Related]
9. Synonymous mutations make dramatic contributions to fitness when growth is limited by a weak-link enzyme.
Kristofich J; Morgenthaler AB; Kinney WR; Ebmeier CC; Snyder DJ; Old WM; Cooper VS; Copley SD
PLoS Genet; 2018 Aug; 14(8):e1007615. PubMed ID: 30148850
[TBL] [Abstract][Full Text] [Related]
10. Molecular Mechanisms and the Significance of Synonymous Mutations.
Oelschlaeger P
Biomolecules; 2024 Jan; 14(1):. PubMed ID: 38275761
[TBL] [Abstract][Full Text] [Related]
11. Selection on synonymous codons in mammalian rhodopsins: a possible role in optimizing translational processes.
Du J; Dungan SZ; Sabouhanian A; Chang BS
BMC Evol Biol; 2014 May; 14():96. PubMed ID: 24884412
[TBL] [Abstract][Full Text] [Related]
12. Optimizing scaleup yield for protein production: Computationally Optimized DNA Assembly (CODA) and Translation Engineering.
Hatfield GW; Roth DA
Biotechnol Annu Rev; 2007; 13():27-42. PubMed ID: 17875472
[TBL] [Abstract][Full Text] [Related]
13. Global analysis of translation termination in E. coli.
Baggett NE; Zhang Y; Gross CA
PLoS Genet; 2017 Mar; 13(3):e1006676. PubMed ID: 28301469
[TBL] [Abstract][Full Text] [Related]
14. Contribution of the Chromosomal
Gupta K; Tripathi A; Sahu A; Varadarajan R
J Bacteriol; 2017 Oct; 199(19):. PubMed ID: 28674066
[TBL] [Abstract][Full Text] [Related]
15. HIV-1 Lethality and Loss of Env Protein Expression Induced by Single Synonymous Substitutions in the Virus Genome Intronic-Splicing Silencer.
Jordan-Paiz A; Nevot M; Lamkiewicz K; Lataretu M; Franco S; Marz M; Martinez MA
J Virol; 2020 Oct; 94(21):. PubMed ID: 32817222
[TBL] [Abstract][Full Text] [Related]
16. The Codon Usage of Lowly Expressed Genes Is Subject to Natural Selection.
Yannai A; Katz S; Hershberg R
Genome Biol Evol; 2018 Apr; 10(5):1237-1246. PubMed ID: 29688501
[TBL] [Abstract][Full Text] [Related]
17. Rationally designed, heterologous S. cerevisiae transcripts expose novel expression determinants.
Ben-Yehezkel T; Atar S; Zur H; Diament A; Goz E; Marx T; Cohen R; Dana A; Feldman A; Shapiro E; Tuller T
RNA Biol; 2015; 12(9):972-84. PubMed ID: 26176266
[TBL] [Abstract][Full Text] [Related]
18. Synonymous codon usage in Escherichia coli: selection for translational accuracy.
Stoletzki N; Eyre-Walker A
Mol Biol Evol; 2007 Feb; 24(2):374-81. PubMed ID: 17101719
[TBL] [Abstract][Full Text] [Related]
19. Role of ribosome release in regulation of tna operon expression in Escherichia coli.
Konan KV; Yanofsky C
J Bacteriol; 1999 Mar; 181(5):1530-6. PubMed ID: 10049385
[TBL] [Abstract][Full Text] [Related]
20. Large-Effect Beneficial Synonymous Mutations Mediate Rapid and Parallel Adaptation in a Bacterium.
Agashe D; Sane M; Phalnikar K; Diwan GD; Habibullah A; Martinez-Gomez NC; Sahasrabuddhe V; Polachek W; Wang J; Chubiz LM; Marx CJ
Mol Biol Evol; 2016 Jun; 33(6):1542-53. PubMed ID: 26908584
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
