173 related articles for article (PubMed ID: 38050973)
1. Differential roles of positive and negative supercoiling in organizing the E. coli genome.
Fu Z; Guo MS; Zhou W; Xiao J
Nucleic Acids Res; 2024 Jan; 52(2):724-737. PubMed ID: 38050973
[TBL] [Abstract][Full Text] [Related]
2. High-resolution, genome-wide mapping of positive supercoiling in chromosomes.
Guo MS; Kawamura R; Littlehale ML; Marko JF; Laub MT
Elife; 2021 Jul; 10():. PubMed ID: 34279217
[TBL] [Abstract][Full Text] [Related]
3. The Stringent Response Inhibits DNA Replication Initiation in E. coli by Modulating Supercoiling of
Kraemer JA; Sanderlin AG; Laub MT
mBio; 2019 Jul; 10(4):. PubMed ID: 31266875
[TBL] [Abstract][Full Text] [Related]
4. Potent stimulation of transcription-coupled DNA supercoiling by sequence-specific DNA-binding proteins.
Leng F; McMacken R
Proc Natl Acad Sci U S A; 2002 Jul; 99(14):9139-44. PubMed ID: 12093906
[TBL] [Abstract][Full Text] [Related]
5. Transcription-coupled hypernegative supercoiling of plasmid DNA by T7 RNA polymerase in Escherichia coli topoisomerase I-deficient strains.
Samul R; Leng F
J Mol Biol; 2007 Dec; 374(4):925-35. PubMed ID: 17980389
[TBL] [Abstract][Full Text] [Related]
6. Psoralen mapping reveals a bacterial genome supercoiling landscape dominated by transcription.
Visser BJ; Sharma S; Chen PJ; McMullin AB; Bates ML; Bates D
Nucleic Acids Res; 2022 May; 50(8):4436-4449. PubMed ID: 35420137
[TBL] [Abstract][Full Text] [Related]
7. Positive supercoiling is generated in the presence of Escherichia coli SeqA protein.
Klungsøyr HK; Skarstad K
Mol Microbiol; 2004 Oct; 54(1):123-31. PubMed ID: 15458410
[TBL] [Abstract][Full Text] [Related]
8. Mutations reducing replication from R-loops suppress the defects of growth, chromosome segregation and DNA supercoiling in cells lacking topoisomerase I and RNase HI activity.
Usongo V; Martel M; Balleydier A; Drolet M
DNA Repair (Amst); 2016 Apr; 40():1-17. PubMed ID: 26947024
[TBL] [Abstract][Full Text] [Related]
9. Transient and dynamic DNA supercoiling potently stimulates the
Zhi X; Dages S; Dages K; Liu Y; Hua ZC; Makemson J; Leng F
J Biol Chem; 2017 Sep; 292(35):14566-14575. PubMed ID: 28696257
[TBL] [Abstract][Full Text] [Related]
10. Influence of Nucleoid-Associated Proteins on DNA Supercoiling.
Dahlke K; Sing CE
J Phys Chem B; 2019 Dec; 123(48):10152-10162. PubMed ID: 31710235
[TBL] [Abstract][Full Text] [Related]
11. Depletion of RNase HI activity in Escherichia coli lacking DNA topoisomerase I leads to defects in DNA supercoiling and segregation.
Usongo V; Nolent F; Sanscartier P; Tanguay C; Broccoli S; Baaklini I; Drlica K; Drolet M
Mol Microbiol; 2008 Aug; 69(4):968-81. PubMed ID: 18554330
[TBL] [Abstract][Full Text] [Related]
12. Topoisomerase I Essentiality, DnaA-Independent Chromosomal Replication, and Transcription-Replication Conflict in Escherichia coli.
Leela JK; Raghunathan N; Gowrishankar J
J Bacteriol; 2021 Aug; 203(17):e0019521. PubMed ID: 34124945
[TBL] [Abstract][Full Text] [Related]
13. Interaction between transcribing RNA polymerase and topoisomerase I prevents R-loop formation in E. coli.
Sutormin D; Galivondzhyan A; Musharova O; Travin D; Rusanova A; Obraztsova K; Borukhov S; Severinov K
Nat Commun; 2022 Aug; 13(1):4524. PubMed ID: 35927234
[TBL] [Abstract][Full Text] [Related]
14. Dependence of transcription-coupled DNA supercoiling on promoter strength in Escherichia coli topoisomerase I deficient strains.
Zhi X; Leng F
Gene; 2013 Feb; 514(2):82-90. PubMed ID: 23201416
[TBL] [Abstract][Full Text] [Related]
15. Hypernegative supercoiling inhibits growth by causing RNA degradation.
Baaklini I; Usongo V; Nolent F; Sanscartier P; Hraiky C; Drlica K; Drolet M
J Bacteriol; 2008 Nov; 190(22):7346-56. PubMed ID: 18790862
[TBL] [Abstract][Full Text] [Related]
16. Effects of RNA polymerase modifications on transcription-induced negative supercoiling and associated R-loop formation.
Broccoli S; Rallu F; Sanscartier P; Cerritelli SM; Crouch RJ; Drolet M
Mol Microbiol; 2004 Jun; 52(6):1769-79. PubMed ID: 15186424
[TBL] [Abstract][Full Text] [Related]
17. [DNA supercoiling and topoisomerases in Escherichia coli].
Gómez-Eichelmann MC; Camacho-Carranza R
Rev Latinoam Microbiol; 1995; 37(3):291-304. PubMed ID: 8850348
[TBL] [Abstract][Full Text] [Related]
18. Tus-mediated arrest of DNA replication in Escherichia coli is modulated by DNA supercoiling.
Valjavec-Gratian M; Henderson TA; Hill TM
Mol Microbiol; 2005 Nov; 58(3):758-73. PubMed ID: 16238625
[TBL] [Abstract][Full Text] [Related]
19. Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome.
Blot N; Mavathur R; Geertz M; Travers A; Muskhelishvili G
EMBO Rep; 2006 Jul; 7(7):710-5. PubMed ID: 16799466
[TBL] [Abstract][Full Text] [Related]
20. Large-Scale Conformational Transitions in Supercoiled DNA Revealed by Coarse-Grained Simulation.
Krajina BA; Spakowitz AJ
Biophys J; 2016 Oct; 111(7):1339-1349. PubMed ID: 27705758
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
