204 related articles for article (PubMed ID: 38078749)
1. A bacterial sensor taxonomy across earth ecosystems for machine learning applications.
Park H; Joachimiak MP; Jungbluth SP; Yang Z; Riehl WJ; Canon RS; Arkin AP; Dehal PS
mSystems; 2024 Jan; 9(1):e0002623. PubMed ID: 38078749
[TBL] [Abstract][Full Text] [Related]
2. Sensing Host Health: Insights from Sensory Protein Signature of the Metagenome.
Bhar S; Singh R; Pinna NK; Bose T; Dutta A; Mande SS
Appl Environ Microbiol; 2022 Aug; 88(15):e0059622. PubMed ID: 35862686
[TBL] [Abstract][Full Text] [Related]
3. Massive metagenomic data analysis using abundance-based machine learning.
Harris ZN; Dhungel E; Mosior M; Ahn TH
Biol Direct; 2019 Aug; 14(1):12. PubMed ID: 31370905
[TBL] [Abstract][Full Text] [Related]
4. Machine Learning Leveraging Genomes from Metagenomes Identifies Influential Antibiotic Resistance Genes in the Infant Gut Microbiome.
Rahman SF; Olm MR; Morowitz MJ; Banfield JF
mSystems; 2018; 3(1):. PubMed ID: 29359195
[TBL] [Abstract][Full Text] [Related]
5. MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning.
Dhungel E; Mreyoud Y; Gwak HJ; Rajeh A; Rho M; Ahn TH
BMC Bioinformatics; 2021 Jan; 22(1):25. PubMed ID: 33461494
[TBL] [Abstract][Full Text] [Related]
6. Microbial sensor variation across biogeochemical conditions in the terrestrial deep subsurface.
Goldman AL; Fulk EM; Momper LM; Heider C; Mulligan J; Osburn M; Masiello CA; Silberg JJ
mSystems; 2024 Jan; 9(1):e0096623. PubMed ID: 38059636
[TBL] [Abstract][Full Text] [Related]
7. TaxiBGC: a Taxonomy-Guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes.
Gupta VK; Bakshi U; Chang D; Lee AR; Davis JM; Chandrasekaran S; Jin YS; Freeman MF; Sung J
mSystems; 2022 Dec; 7(6):e0092522. PubMed ID: 36378489
[TBL] [Abstract][Full Text] [Related]
8. Machine learning for data integration in human gut microbiome.
Li P; Luo H; Ji B; Nielsen J
Microb Cell Fact; 2022 Nov; 21(1):241. PubMed ID: 36419034
[TBL] [Abstract][Full Text] [Related]
9. Reference-Free Plant Disease Detection Using Machine Learning and Long-Read Metagenomic Sequencing.
Johnson MA; Vinatzer BA; Li S
Appl Environ Microbiol; 2023 Jun; 89(6):e0026023. PubMed ID: 37184398
[TBL] [Abstract][Full Text] [Related]
10. Investigation of machine learning algorithms for taxonomic classification of marine metagenomes.
Park H; Lim SJ; Cosme J; O'Connell K; Sandeep J; Gayanilo F; Cutter GR; Montes E; Nitikitpaiboon C; Fisher S; Moustahfid H; Thompson LR
Microbiol Spectr; 2023 Sep; 11(5):e0523722. PubMed ID: 37695074
[TBL] [Abstract][Full Text] [Related]
11. Comprehensive Functional Annotation of Metagenomes and Microbial Genomes Using a Deep Learning-Based Method.
Maranga M; Szczerbiak P; Bezshapkin V; Gligorijevic V; Chandler C; Bonneau R; Xavier RJ; Vatanen T; Kosciolek T
mSystems; 2023 Apr; 8(2):e0117822. PubMed ID: 37010293
[TBL] [Abstract][Full Text] [Related]
12. VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences.
Kieft K; Zhou Z; Anantharaman K
Microbiome; 2020 Jun; 8(1):90. PubMed ID: 32522236
[TBL] [Abstract][Full Text] [Related]
13. Microbial Diversity and Phage-Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing.
Jaiani E; Kusradze I; Kokashvili T; Geliashvili N; Janelidze N; Kotorashvili A; Kotaria N; Guchmanidze A; Tediashvili M; Prangishvili D
Mar Drugs; 2020 Nov; 18(11):. PubMed ID: 33202695
[TBL] [Abstract][Full Text] [Related]
14. Framework for exploring the sensory repertoire of the human gut microbiota.
Ross PA; Xu W; Jalomo-Khayrova E; Bange G; Gumerov VM; Bradley PH; Sourjik V; Zhulin IB
mBio; 2024 Jun; 15(6):e0103924. PubMed ID: 38757952
[TBL] [Abstract][Full Text] [Related]
15. Incorporating genome-based phylogeny and functional similarity into diversity assessments helps to resolve a global collection of human gut metagenomes.
Youngblut ND; de la Cuesta-Zuluaga J; Ley RE
Environ Microbiol; 2022 Sep; 24(9):3966-3984. PubMed ID: 35049120
[TBL] [Abstract][Full Text] [Related]
16. Separation of Donor and Recipient Microbial Diversity Allows Determination of Taxonomic and Functional Features of Gut Microbiota Restructuring following Fecal Transplantation.
Olekhnovich EI; Ivanov AB; Ulyantsev VI; Ilina EN
mSystems; 2021 Aug; 6(4):e0081121. PubMed ID: 34402648
[TBL] [Abstract][Full Text] [Related]
17. A machine learning framework to determine geolocations from metagenomic profiling.
Huang L; Xu C; Yang W; Yu R
Biol Direct; 2020 Nov; 15(1):27. PubMed ID: 33225966
[TBL] [Abstract][Full Text] [Related]
18. Supervised Machine Learning Enables Geospatial Microbial Provenance.
Bhattacharya C; Tierney BT; Ryon KA; Bhattacharyya M; Hastings JJA; Basu S; Bhattacharya B; Bagchi D; Mukherjee S; Wang L; Henaff EM; Mason CE
Genes (Basel); 2022 Oct; 13(10):. PubMed ID: 36292799
[TBL] [Abstract][Full Text] [Related]
19. Metagenomic evidence for a polymicrobial signature of sepsis.
Tan CCS; Acman M; van Dorp L; Balloux F
Microb Genom; 2021 Sep; 7(9):. PubMed ID: 34477543
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]