221 related articles for article (PubMed ID: 38093010)
21. Integrated spatial genomics reveals global architecture of single nuclei.
Takei Y; Yun J; Zheng S; Ollikainen N; Pierson N; White J; Shah S; Thomassie J; Suo S; Eng CL; Guttman M; Yuan GC; Cai L
Nature; 2021 Feb; 590(7845):344-350. PubMed ID: 33505024
[TBL] [Abstract][Full Text] [Related]
22. Epigenetic regulation during cancer transitions across 11 tumour types.
Terekhanova NV; Karpova A; Liang WW; Strzalkowski A; Chen S; Li Y; Southard-Smith AN; Iglesia MD; Wendl MC; Jayasinghe RG; Liu J; Song Y; Cao S; Houston A; Liu X; Wyczalkowski MA; Lu RJ; Caravan W; Shinkle A; Naser Al Deen N; Herndon JM; Mudd J; Ma C; Sarkar H; Sato K; Ibrahim OM; Mo CK; Chasnoff SE; Porta-Pardo E; Held JM; Pachynski R; Schwarz JK; Gillanders WE; Kim AH; Vij R; DiPersio JF; Puram SV; Chheda MG; Fuh KC; DeNardo DG; Fields RC; Chen F; Raphael BJ; Ding L
Nature; 2023 Nov; 623(7986):432-441. PubMed ID: 37914932
[TBL] [Abstract][Full Text] [Related]
23. dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments.
Petukhov V; Guo J; Baryawno N; Severe N; Scadden DT; Samsonova MG; Kharchenko PV
Genome Biol; 2018 Jun; 19(1):78. PubMed ID: 29921301
[TBL] [Abstract][Full Text] [Related]
24. Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain.
Liu H; Zeng Q; Zhou J; Bartlett A; Wang BA; Berube P; Tian W; Kenworthy M; Altshul J; Nery JR; Chen H; Castanon RG; Zu S; Li YE; Lucero J; Osteen JK; Pinto-Duarte A; Lee J; Rink J; Cho S; Emerson N; Nunn M; O'Connor C; Wu Z; Stoica I; Yao Z; Smith KA; Tasic B; Luo C; Dixon JR; Zeng H; Ren B; Behrens MM; Ecker JR
Nature; 2023 Dec; 624(7991):366-377. PubMed ID: 38092913
[TBL] [Abstract][Full Text] [Related]
25. Parallel bimodal single-cell sequencing of transcriptome and chromatin accessibility.
Xing QR; Farran CAE; Zeng YY; Yi Y; Warrier T; Gautam P; Collins JJ; Xu J; Dröge P; Koh CG; Li H; Zhang LF; Loh YH
Genome Res; 2020 Jul; 30(7):1027-1039. PubMed ID: 32699019
[TBL] [Abstract][Full Text] [Related]
26. Comparative Analysis of Droplet-Based Ultra-High-Throughput Single-Cell RNA-Seq Systems.
Zhang X; Li T; Liu F; Chen Y; Yao J; Li Z; Huang Y; Wang J
Mol Cell; 2019 Jan; 73(1):130-142.e5. PubMed ID: 30472192
[TBL] [Abstract][Full Text] [Related]
27. Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia.
Sansom SN; Shikama-Dorn N; Zhanybekova S; Nusspaumer G; Macaulay IC; Deadman ME; Heger A; Ponting CP; Holländer GA
Genome Res; 2014 Dec; 24(12):1918-31. PubMed ID: 25224068
[TBL] [Abstract][Full Text] [Related]
28. Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections.
Salmén F; Ståhl PL; Mollbrink A; Navarro JF; Vickovic S; Frisén J; Lundeberg J
Nat Protoc; 2018 Nov; 13(11):2501-2534. PubMed ID: 30353172
[TBL] [Abstract][Full Text] [Related]
29. FB5P-seq: FACS-Based 5-Prime End Single-Cell RNA-seq for Integrative Analysis of Transcriptome and Antigen Receptor Repertoire in B and T Cells.
Attaf N; Cervera-Marzal I; Dong C; Gil L; Renand A; Spinelli L; Milpied P
Front Immunol; 2020; 11():216. PubMed ID: 32194545
[TBL] [Abstract][Full Text] [Related]
30. ZipSeq: barcoding for real-time mapping of single cell transcriptomes.
Hu KH; Eichorst JP; McGinnis CS; Patterson DM; Chow ED; Kersten K; Jameson SC; Gartner ZJ; Rao AA; Krummel MF
Nat Methods; 2020 Aug; 17(8):833-843. PubMed ID: 32632238
[TBL] [Abstract][Full Text] [Related]
31. Cell Type-Specific Profiling of Chromatin Modifications and Associated Proteins.
Morao AK; Caillieux E; Colot V; Roudier F
Methods Mol Biol; 2018; 1675():111-130. PubMed ID: 29052189
[TBL] [Abstract][Full Text] [Related]
32. Multiplexing Methods for Simultaneous Large-Scale Transcriptomic Profiling of Samples at Single-Cell Resolution.
Cheng J; Liao J; Shao X; Lu X; Fan X
Adv Sci (Weinh); 2021 Sep; 8(17):e2101229. PubMed ID: 34240574
[TBL] [Abstract][Full Text] [Related]
33. Spatial atlas of the mouse central nervous system at molecular resolution.
Shi H; He Y; Zhou Y; Huang J; Maher K; Wang B; Tang Z; Luo S; Tan P; Wu M; Lin Z; Ren J; Thapa Y; Tang X; Chan KY; Deverman BE; Shen H; Liu A; Liu J; Wang X
Nature; 2023 Oct; 622(7983):552-561. PubMed ID: 37758947
[TBL] [Abstract][Full Text] [Related]
34. Analysis of Transcriptional Profiling of Immune Cells at the Single-Cell Level.
Ferguson A; Chen K
Methods Mol Biol; 2020; 2111():47-57. PubMed ID: 31933197
[TBL] [Abstract][Full Text] [Related]
35. Elucidating the cellular dynamics of the brain with single-cell RNA sequencing.
Cardona-Alberich A; Tourbez M; Pearce SF; Sibley CR
RNA Biol; 2021 Jul; 18(7):1063-1084. PubMed ID: 33499699
[TBL] [Abstract][Full Text] [Related]
36. Spatially Resolved Transcriptomics Enables Dissection of Genetic Heterogeneity in Stage III Cutaneous Malignant Melanoma.
Thrane K; Eriksson H; Maaskola J; Hansson J; Lundeberg J
Cancer Res; 2018 Oct; 78(20):5970-5979. PubMed ID: 30154148
[TBL] [Abstract][Full Text] [Related]
37. Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH.
Eng CL; Lawson M; Zhu Q; Dries R; Koulena N; Takei Y; Yun J; Cronin C; Karp C; Yuan GC; Cai L
Nature; 2019 Apr; 568(7751):235-239. PubMed ID: 30911168
[TBL] [Abstract][Full Text] [Related]
38. Schema: metric learning enables interpretable synthesis of heterogeneous single-cell modalities.
Singh R; Hie BL; Narayan A; Berger B
Genome Biol; 2021 May; 22(1):131. PubMed ID: 33941239
[TBL] [Abstract][Full Text] [Related]
39. Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomic data with nonuniform cellular densities.
Miller BF; Bambah-Mukku D; Dulac C; Zhuang X; Fan J
Genome Res; 2021 Oct; 31(10):1843-1855. PubMed ID: 34035045
[TBL] [Abstract][Full Text] [Related]
40. Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression.
Xia C; Fan J; Emanuel G; Hao J; Zhuang X
Proc Natl Acad Sci U S A; 2019 Sep; 116(39):19490-19499. PubMed ID: 31501331
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
