BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

222 related articles for article (PubMed ID: 38111464)

  • 1. Hydrogen bonding in duplex DNA probed by DNP enhanced solid-state NMR N-H bond length measurements.
    Bhai L; Thomas JK; Conroy DW; Xu Y; Al-Hashimi HM; Jaroniec CP
    Front Mol Biosci; 2023; 10():1286172. PubMed ID: 38111464
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Atomic structures of excited state A-T Hoogsteen base pairs in duplex DNA by combining NMR relaxation dispersion, mutagenesis, and chemical shift calculations.
    Shi H; Clay MC; Rangadurai A; Sathyamoorthy B; Case DA; Al-Hashimi HM
    J Biomol NMR; 2018 Apr; 70(4):229-244. PubMed ID: 29675775
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Probing Watson-Crick and Hoogsteen base pairing in duplex DNA using dynamic nuclear polarization solid-state NMR spectroscopy.
    Conroy DW; Xu Y; Shi H; Gonzalez Salguero N; Purusottam RN; Shannon MD; Al-Hashimi HM; Jaroniec CP
    Proc Natl Acad Sci U S A; 2022 Jul; 119(30):e2200681119. PubMed ID: 35857870
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Direct evidence for (G)O6···H
    Rangadurai A; Kremser J; Shi H; Kreutz C; Al-Hashimi HM
    J Magn Reson; 2019 Nov; 308():106589. PubMed ID: 31539864
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A historical account of Hoogsteen base-pairs in duplex DNA.
    Nikolova EN; Zhou H; Gottardo FL; Alvey HS; Kimsey IJ; Al-Hashimi HM
    Biopolymers; 2013 Dec; 99(12):955-68. PubMed ID: 23818176
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The first example of a Hoogsteen base-paired DNA duplex in dynamic equilibrium with a Watson-Crick base-paired duplex--a structural (NMR), kinetic and thermodynamic study.
    Isaksson J; Zamaratski E; Maltseva TV; Agback P; Kumar A; Chattopadhyaya J
    J Biomol Struct Dyn; 2001 Jun; 18(6):783-806. PubMed ID: 11444368
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Effect of Watson-Crick and Hoogsteen base pairing on the conformational stability of C8-phenoxyl-2'-deoxyguanosine adducts.
    Millen AL; Churchill CD; Manderville RA; Wetmore SD
    J Phys Chem B; 2010 Oct; 114(40):12995-3004. PubMed ID: 20853889
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evidence for Watson-Crick and not Hoogsteen or wobble base pairing in the selection of nucleotides for insertion opposite pyrimidines and a thymine dimer by yeast DNA pol eta.
    Hwang H; Taylor JS
    Biochemistry; 2005 Mar; 44(12):4850-60. PubMed ID: 15779911
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Correlation of crystallographically determined and computationally predicted hydrogen-bonded pairing configurations of nucleic acid bases.
    Ornstein RL; Fresco JR
    Proc Natl Acad Sci U S A; 1983 Sep; 80(17):5171-5. PubMed ID: 6577415
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Rebek imides and their adenine complexes: preferences for Hoogsteen binding in the solid state and in solution.
    Castellano RK; Gramlich V; Diederich F
    Chemistry; 2002 Jan; 8(1):118-29. PubMed ID: 11822445
    [TBL] [Abstract][Full Text] [Related]  

  • 11. [Structural and Dipole Structure Peculiarities of Hoogsteen Base Pairs Formed in Complementary Nucleobases according to ab initio Quantum Mechanics Studies].
    Petrenko YM
    Biofizika; 2015; 60(5):853-60. PubMed ID: 26591595
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA.
    Nikolova EN; Goh GB; Brooks CL; Al-Hashimi HM
    J Am Chem Soc; 2013 May; 135(18):6766-9. PubMed ID: 23506098
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically
    Zhou H; Sathyamoorthy B; Stelling A; Xu Y; Xue Y; Pigli YZ; Case DA; Rice PA; Al-Hashimi HM
    Biochemistry; 2019 Apr; 58(15):1963-1974. PubMed ID: 30950607
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Direct NMR Evidence that Transient Tautomeric and Anionic States in dG·dT Form Watson-Crick-like Base Pairs.
    Szymanski ES; Kimsey IJ; Al-Hashimi HM
    J Am Chem Soc; 2017 Mar; 139(12):4326-4329. PubMed ID: 28290687
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Infrared Spectroscopic Observation of a G-C
    Stelling AL; Liu AY; Zeng W; Salinas R; Schumacher MA; Al-Hashimi HM
    Angew Chem Int Ed Engl; 2019 Aug; 58(35):12010-12013. PubMed ID: 31268220
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Hoogsteen base pairs increase the susceptibility of double-stranded DNA to cytotoxic damage.
    Xu Y; Manghrani A; Liu B; Shi H; Pham U; Liu A; Al-Hashimi HM
    J Biol Chem; 2020 Nov; 295(47):15933-15947. PubMed ID: 32913127
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution.
    Nikolova EN; Gottardo FL; Al-Hashimi HM
    J Am Chem Soc; 2012 Feb; 134(8):3667-70. PubMed ID: 22309937
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Recognition and cleavage of single-stranded DNA containing hairpin structures by oligonucleotides forming both Watson-Crick and Hoogsteen hydrogen bonds.
    François JC; Hélène C
    Biochemistry; 1995 Jan; 34(1):65-72. PubMed ID: 7819224
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Guanine to inosine substitution leads to large increases in the population of a transient G·C Hoogsteen base pair.
    Nikolova EN; Stull F; Al-Hashimi HM
    Biochemistry; 2014 Nov; 53(46):7145-7. PubMed ID: 25339065
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Revealing A-T and G-C Hoogsteen base pairs in stressed protein-bound duplex DNA.
    Shi H; Kimsey IJ; Gu S; Liu HF; Pham U; Schumacher MA; Al-Hashimi HM
    Nucleic Acids Res; 2021 Dec; 49(21):12540-12555. PubMed ID: 34792150
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.