152 related articles for article (PubMed ID: 38124281)
1. Performance of non-formalin fixed paraffin embedded samples in hybrid capture and amplicon next-generation sequencing panels.
Meireles SI; Cruz MV; de Godoy CD; de Testagrossa L
Diagn Cytopathol; 2024 Mar; 52(3):171-182. PubMed ID: 38124281
[TBL] [Abstract][Full Text] [Related]
2. Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue.
Hedegaard J; Thorsen K; Lund MK; Hein AM; Hamilton-Dutoit SJ; Vang S; Nordentoft I; Birkenkamp-Demtröder K; Kruhøffer M; Hager H; Knudsen B; Andersen CL; Sørensen KD; Pedersen JS; Ørntoft TF; Dyrskjøt L
PLoS One; 2014; 9(5):e98187. PubMed ID: 24878701
[TBL] [Abstract][Full Text] [Related]
3. Performance comparison of two commercial human whole-exome capture systems on formalin-fixed paraffin-embedded lung adenocarcinoma samples.
Bonfiglio S; Vanni I; Rossella V; Truini A; Lazarevic D; Dal Bello MG; Alama A; Mora M; Rijavec E; Genova C; Cittaro D; Grossi F; Coco S
BMC Cancer; 2016 Aug; 16(1):692. PubMed ID: 27578032
[TBL] [Abstract][Full Text] [Related]
4. Targeted capture-based NGS is superior to multiplex PCR-based NGS for hereditary BRCA1 and BRCA2 gene analysis in FFPE tumor samples.
Zakrzewski F; Gieldon L; Rump A; Seifert M; Grützmann K; Krüger A; Loos S; Zeugner S; Hackmann K; Porrmann J; Wagner J; Kast K; Wimberger P; Baretton G; Schröck E; Aust D; Klink B
BMC Cancer; 2019 Apr; 19(1):396. PubMed ID: 31029168
[TBL] [Abstract][Full Text] [Related]
5. Performance of amplicon-based next generation DNA sequencing for diagnostic gene mutation profiling in oncopathology.
Sie D; Snijders PJ; Meijer GA; Doeleman MW; van Moorsel MI; van Essen HF; Eijk PP; Grünberg K; van Grieken NC; Thunnissen E; Verheul HM; Smit EF; Ylstra B; Heideman DA
Cell Oncol (Dordr); 2014 Oct; 37(5):353-61. PubMed ID: 25209392
[TBL] [Abstract][Full Text] [Related]
6. Next-Generation Sequencing Using S1 Nuclease for Poor-Quality Formalin-Fixed, Paraffin-Embedded Tumor Specimens.
Chun SM; Sung CO; Jeon H; Kim TI; Lee JY; Park H; Kim Y; Kim D; Jang SJ
J Mol Diagn; 2018 Nov; 20(6):802-811. PubMed ID: 30055350
[TBL] [Abstract][Full Text] [Related]
7. Cytology smears as excellent starting material for next-generation sequencing-based molecular testing of patients with adenocarcinoma of the lung.
Velizheva NP; Rechsteiner MP; Wong CE; Zhong Q; Rössle M; Bode B; Moch H; Soltermann A; Wild PJ; Tischler V
Cancer Cytopathol; 2017 Jan; 125(1):30-40. PubMed ID: 27636102
[TBL] [Abstract][Full Text] [Related]
8. Alternative Tissue Fixation Protocols Dramatically Reduce the Impact of DNA Artifacts, Unraveling the Interpretation of Clinical Comprehensive Genomic Profiling.
Berrino E; Bellomo SE; Chesta A; Detillo P; Bragoni A; Gagliardi A; Naccarati A; Cereda M; Witel G; Sapino A; Bussolati B; Bussolati G; Marchiò C
Lab Invest; 2024 Jan; 104(1):100280. PubMed ID: 38345263
[TBL] [Abstract][Full Text] [Related]
9. Use of FFPE-derived DNA in next generation sequencing: DNA extraction methods.
McDonough SJ; Bhagwate A; Sun Z; Wang C; Zschunke M; Gorman JA; Kopp KJ; Cunningham JM
PLoS One; 2019; 14(4):e0211400. PubMed ID: 30973937
[TBL] [Abstract][Full Text] [Related]
10. Whole exome sequencing (WES) on formalin-fixed, paraffin-embedded (FFPE) tumor tissue in gastrointestinal stromal tumors (GIST).
Astolfi A; Urbini M; Indio V; Nannini M; Genovese CG; Santini D; Saponara M; Mandrioli A; Ercolani G; Brandi G; Biasco G; Pantaleo MA
BMC Genomics; 2015 Nov; 16():892. PubMed ID: 26531060
[TBL] [Abstract][Full Text] [Related]
11. Inter-assay variability of next-generation sequencing-based gene panels.
Quy PN; Fukuyama K; Kanai M; Kou T; Kondo T; Yoshioka M; Matsubara J; Sakuma T; Minamiguchi S; Matsumoto S; Muto M
BMC Med Genomics; 2022 Apr; 15(1):86. PubMed ID: 35428255
[TBL] [Abstract][Full Text] [Related]
12. A multi-institutional study to evaluate the feasibility of next-generation sequencing and genomic analysis using formalin-fixed, paraffin-embedded biopsies of gastric cancer.
Kanda M; Terashima M; Kinoshita T; Yabusaki H; Tokunaga M; Kodera Y
Gastric Cancer; 2023 Jan; 26(1):108-115. PubMed ID: 36369312
[TBL] [Abstract][Full Text] [Related]
13. Targeted Next Generation Sequencing as a Reliable Diagnostic Assay for the Detection of Somatic Mutations in Tumours Using Minimal DNA Amounts from Formalin Fixed Paraffin Embedded Material.
de Leng WW; Gadellaa-van Hooijdonk CG; Barendregt-Smouter FA; Koudijs MJ; Nijman I; Hinrichs JW; Cuppen E; van Lieshout S; Loberg RD; de Jonge M; Voest EE; de Weger RA; Steeghs N; Langenberg MH; Sleijfer S; Willems SM; Lolkema MP
PLoS One; 2016; 11(2):e0149405. PubMed ID: 26919633
[TBL] [Abstract][Full Text] [Related]
14. RNA Extraction Method Impacts Quality Metrics and Sequencing Results in Formalin-Fixed, Paraffin-Embedded Tissue Samples.
Decruyenaere P; Verniers K; Poma-Soto F; Van Dorpe J; Offner F; Vandesompele J
Lab Invest; 2023 Feb; 103(2):100027. PubMed ID: 37039153
[TBL] [Abstract][Full Text] [Related]
15. Fragmentation assessment of FFPE DNA helps in evaluating NGS library complexity and interpretation of NGS results.
Ottestad AL; Emdal EF; Grønberg BH; Halvorsen TO; Dai HY
Exp Mol Pathol; 2022 Jun; 126():104771. PubMed ID: 35427578
[TBL] [Abstract][Full Text] [Related]
16. Evaluation of two highly-multiplexed custom panels for massively parallel semiconductor sequencing on paraffin DNA.
Kotoula V; Lyberopoulou A; Papadopoulou K; Charalambous E; Alexopoulou Z; Gakou C; Lakis S; Tsolaki E; Lilakos K; Fountzilas G
PLoS One; 2015; 10(6):e0128818. PubMed ID: 26039550
[TBL] [Abstract][Full Text] [Related]
17. Influence of formalin fixation duration on RNA quality and quantity from formalin-fixed paraffin-embedded hepatocellular carcinoma tissues.
Amemiya K; Hirotsu Y; Nagakubo Y; Mochizuki H; Oyama T; Omata M
Pathol Int; 2023 Dec; 73(12):593-600. PubMed ID: 37933792
[TBL] [Abstract][Full Text] [Related]
18. Evaluation of DNA and RNA quality from archival formalin-fixed paraffin-embedded tissue for next-generation sequencing - Retrospective study in Japanese single institution.
Fujii T; Uchiyama T; Matsuoka M; Myojin T; Sugimoto S; Nitta Y; Okabe F; Sugimoto A; Sekita-Hatakeyama Y; Morita K; Itami H; Hatakeyama K; Ohbayashi C
Pathol Int; 2020 Sep; 70(9):602-611. PubMed ID: 32542983
[TBL] [Abstract][Full Text] [Related]
19. An Improved NGS Library Construction Approach Using DNA Isolated from Human Cancer Formalin-Fixed Paraffin-Embedded Samples.
Zhang C; Wang Y; Hu X; Qin L; Yin T; Fu W; Fan G; Zhang H; Liu G; Jiang Z; Zhang X; Li X
Anat Rec (Hoboken); 2019 Jun; 302(6):941-946. PubMed ID: 30365237
[TBL] [Abstract][Full Text] [Related]
20. Performance comparison of three DNA extraction kits on human whole-exome data from formalin-fixed paraffin-embedded normal and tumor samples.
Bonnet E; Moutet ML; Baulard C; Bacq-Daian D; Sandron F; Mesrob L; Fin B; Delépine M; Palomares MA; Jubin C; Blanché H; Meyer V; Boland A; Olaso R; Deleuze JF
PLoS One; 2018; 13(4):e0195471. PubMed ID: 29621323
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
