These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

144 related articles for article (PubMed ID: 38193550)

  • 1. Data-driven dynamical coarse-graining for condensed matter systems.
    Del Razo MJ; Crommelin D; Bolhuis PG
    J Chem Phys; 2024 Jan; 160(2):. PubMed ID: 38193550
    [TBL] [Abstract][Full Text] [Related]  

  • 2. First-principle approach to rescale the dynamics of simulated coarse-grained macromolecular liquids.
    Lyubimov I; Guenza MG
    Phys Rev E Stat Nonlin Soft Matter Phys; 2011 Sep; 84(3 Pt 1):031801. PubMed ID: 22060394
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence.
    Davtyan A; Dama JF; Voth GA; Andersen HC
    J Chem Phys; 2015 Apr; 142(15):154104. PubMed ID: 25903863
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computing the non-Markovian coarse-grained interactions derived from the Mori-Zwanzig formalism in molecular systems: Application to polymer melts.
    Li Z; Lee HS; Darve E; Karniadakis GE
    J Chem Phys; 2017 Jan; 146(1):014104. PubMed ID: 28063444
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dynamic coarse-graining of linear and non-linear systems: Mori-Zwanzig formalism and beyond.
    Jung B; Jung G
    J Chem Phys; 2023 Aug; 159(8):. PubMed ID: 37615392
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cross-correlation corrected friction in generalized Langevin models: Application to the continuous Asakura-Oosawa model.
    Klippenstein V; van der Vegt NFA
    J Chem Phys; 2022 Jul; 157(4):044103. PubMed ID: 35922348
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Implicit-solvent coarse-grained modeling for polymer solutions via Mori-Zwanzig formalism.
    Wang S; Li Z; Pan W
    Soft Matter; 2019 Oct; 15(38):7567-7582. PubMed ID: 31436282
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A test of systematic coarse-graining of molecular dynamics simulations: Transport properties.
    Fu CC; Kulkarni PM; Shell MS; Leal LG
    J Chem Phys; 2013 Sep; 139(9):094107. PubMed ID: 24028102
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A comparative study of coarse-graining methods for polymeric fluids: Mori-Zwanzig vs. iterative Boltzmann inversion vs. stochastic parametric optimization.
    Li Z; Bian X; Yang X; Karniadakis GE
    J Chem Phys; 2016 Jul; 145(4):044102. PubMed ID: 27475343
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Systematic bottom-up molecular coarse-graining via force and torque matching using anisotropic particles.
    Nguyen HTL; Huang DM
    J Chem Phys; 2022 May; 156(18):184118. PubMed ID: 35568534
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Data-driven coarse-grained modeling of non-equilibrium systems.
    Wang S; Ma Z; Pan W
    Soft Matter; 2021 Jul; 17(26):6404-6412. PubMed ID: 34132317
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Incorporation of memory effects in coarse-grained modeling via the Mori-Zwanzig formalism.
    Li Z; Bian X; Li X; Karniadakis GE
    J Chem Phys; 2015 Dec; 143(24):243128. PubMed ID: 26723613
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Coarse-graining of microscopic dynamics into a mesoscopic transient potential model.
    Uneyama T
    Phys Rev E; 2020 Mar; 101(3-1):032106. PubMed ID: 32290004
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Mean first passage times in variational coarse graining using Markov state models.
    Kells A; Mihálka ZÉ; Annibale A; Rosta E
    J Chem Phys; 2019 Apr; 150(13):134107. PubMed ID: 30954057
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Non-Markovian systems out of equilibrium: exact results for two routes of coarse graining.
    Jung G
    J Phys Condens Matter; 2022 Mar; 34(20):. PubMed ID: 35180708
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Machine Learning of Coarse-Grained Molecular Dynamics Force Fields.
    Wang J; Olsson S; Wehmeyer C; Pérez A; Charron NE; de Fabritiis G; Noé F; Clementi C
    ACS Cent Sci; 2019 May; 5(5):755-767. PubMed ID: 31139712
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Theory of wavelet-based coarse-graining hierarchies for molecular dynamics.
    Rinderspacher BC; Bardhan JP; Ismail AE
    Phys Rev E; 2017 Jul; 96(1-1):013301. PubMed ID: 29347065
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Information-theoretic tools for parametrized coarse-graining of non-equilibrium extended systems.
    Katsoulakis MA; Plechác P
    J Chem Phys; 2013 Aug; 139(7):074115. PubMed ID: 23968080
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important Systems.
    Liwo A; Czaplewski C; Sieradzan AK; Lipska AG; Samsonov SA; Murarka RK
    Biomolecules; 2021 Sep; 11(9):. PubMed ID: 34572559
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.