241 related articles for article (PubMed ID: 38203780)
1. AtSNP_TATAdb: Candidate Molecular Markers of Plant Advantages Related to Single Nucleotide Polymorphisms within Proximal Promoters of
Bogomolov A; Zolotareva K; Filonov S; Chadaeva I; Rasskazov D; Sharypova E; Podkolodnyy N; Ponomarenko P; Savinkova L; Tverdokhleb N; Khandaev B; Kondratyuk E; Podkolodnaya O; Zemlyanskaya E; Kolchanov NA; Ponomarenko M
Int J Mol Sci; 2024 Jan; 25(1):. PubMed ID: 38203780
[TBL] [Abstract][Full Text] [Related]
2. Human_SNP_TATAdb: a database of SNPs that statistically significantly change the affinity of the TATA-binding protein to human gene promoters: genome-wide analysis and use cases.
Filonov SV; Podkolodnyy NL; Podkolodnaya OA; Tverdokhleb NN; Ponomarenko PM; Rasskazov DA; Bogomolov AG; Ponomarenko MP
Vavilovskii Zhurnal Genet Selektsii; 2023 Dec; 27(7):728-736. PubMed ID: 38213714
[TBL] [Abstract][Full Text] [Related]
3. Candidate SNP Markers of Atherogenesis Significantly Shifting the Affinity of TATA-Binding Protein for Human Gene Promoters show stabilizing Natural Selection as a Sum of Neutral Drift Accelerating Atherogenesis and Directional Natural Selection Slowing It.
Ponomarenko M; Rasskazov D; Chadaeva I; Sharypova E; Drachkova I; Oshchepkov D; Ponomarenko P; Savinkova L; Oshchepkova E; Nazarenko M; Kolchanov N
Int J Mol Sci; 2020 Feb; 21(3):. PubMed ID: 32033288
[TBL] [Abstract][Full Text] [Related]
4. Disruptive natural selection by male reproductive potential prevents underexpression of protein-coding genes on the human Y chromosome as a self-domestication syndrome.
Ponomarenko M; Kleshchev M; Ponomarenko P; Chadaeva I; Sharypova E; Rasskazov D; Kolmykov S; Drachkova I; Vasiliev G; Gutorova N; Ignatieva E; Savinkova L; Bogomolov A; Osadchuk L; Osadchuk A; Oshchepkov D
BMC Genet; 2020 Oct; 21(Suppl 1):89. PubMed ID: 33092533
[TBL] [Abstract][Full Text] [Related]
5. Plant_SNP_TATA_Z-Tester: A Web Service That Unequivocally Estimates the Impact of Proximal Promoter Mutations on Plant Gene Expression.
Rasskazov D; Chadaeva I; Sharypova E; Zolotareva K; Khandaev B; Ponomarenko P; Podkolodnyy N; Tverdokhleb N; Vishnevsky O; Bogomolov A; Podkolodnaya O; Savinkova L; Zemlyanskaya E; Golubyatnikov V; Kolchanov N; Ponomarenko M
Int J Mol Sci; 2022 Aug; 23(15):. PubMed ID: 35955817
[TBL] [Abstract][Full Text] [Related]
6. Candidate SNP markers of aggressiveness-related complications and comorbidities of genetic diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters.
Chadaeva IV; Ponomarenko MP; Rasskazov DA; Sharypova EB; Kashina EV; Matveeva MY; Arshinova TV; Ponomarenko PM; Arkova OV; Bondar NP; Savinkova LK; Kolchanov NA
BMC Genomics; 2016 Dec; 17(Suppl 14):995. PubMed ID: 28105927
[TBL] [Abstract][Full Text] [Related]
7. An experimental verification of the predicted effects of promoter TATA-box polymorphisms associated with human diseases on interactions between the TATA boxes and TATA-binding protein.
Savinkova L; Drachkova I; Arshinova T; Ponomarenko P; Ponomarenko M; Kolchanov N
PLoS One; 2013; 8(2):e54626. PubMed ID: 23424617
[TBL] [Abstract][Full Text] [Related]
8. Promoters of genes encoding β-amylase, albumin and globulin in food plants have weaker affinity for TATA-binding protein as compared to non-food plants: in silico analysis.
Vishnevsky OV; Chadaeva IV; Sharypova EB; Khandaev BM; Zolotareva KA; Kazachek AV; Ponomarenko PM; Podkolodny NL; Rasskazov DA; Bogomolov AG; Podkolodnaya OA; Savinkova LK; Zemlyanskaya EV; Ponomarenko MP
Vavilovskii Zhurnal Genet Selektsii; 2022 Dec; 26(8):798-805. PubMed ID: 36694715
[TBL] [Abstract][Full Text] [Related]
9. [Candidate SNP-markers altering TBP binding affinity for promoters of the Y-linked genes CDY2A, SHOX, and ZFY are lowering many indexes of reproductive potential in men].
Ponomarenko MP; Sharypova EB; Drachkova IA; Savinkova LK; Chadaeva IV; Rasskazov DA; Ponomarenko PM; Osadchuk LV; Osadchuk AV
Vavilovskii Zhurnal Genet Selektsii; 2020 Nov; 24(7):785-793. PubMed ID: 33959695
[TBL] [Abstract][Full Text] [Related]
10. Both Arabidopsis TATA binding protein (TBP) isoforms are functionally identical in RNA polymerase II and III transcription in plant cells: evidence for gene-specific changes in DNA binding specificity of TBP.
Heard DJ; Kiss T; Filipowicz W
EMBO J; 1993 Sep; 12(9):3519-28. PubMed ID: 8253078
[TBL] [Abstract][Full Text] [Related]
11. Candidate SNP markers of reproductive potential are predicted by a significant change in the affinity of TATA-binding protein for human gene promoters.
Chadaeva IV; Ponomarenko PM; Rasskazov DA; Sharypova EB; Kashina EV; Zhechev DA; Drachkova IA; Arkova OV; Savinkova LK; Ponomarenko MP; Kolchanov NA; Osadchuk LV; Osadchuk AV
BMC Genomics; 2018 Feb; 19(Suppl 3):0. PubMed ID: 29504899
[TBL] [Abstract][Full Text] [Related]
12. Unannotated single nucleotide polymorphisms in the TATA box of erythropoiesis genes show in vitro positive involvements in cognitive and mental disorders.
Ponomarenko M; Sharypova E; Drachkova I; Chadaeva I; Arkova O; Podkolodnaya O; Ponomarenko P; Kolchanov N; Savinkova L
BMC Med Genet; 2020 Oct; 21(Suppl 1):165. PubMed ID: 33092544
[TBL] [Abstract][Full Text] [Related]
13. Genome wide analysis of Arabidopsis core promoters.
Molina C; Grotewold E
BMC Genomics; 2005 Feb; 6():25. PubMed ID: 15733318
[TBL] [Abstract][Full Text] [Related]
14. Obesity-related known and candidate SNP markers can significantly change affinity of TATA-binding protein for human gene promoters.
Arkova OV; Ponomarenko MP; Rasskazov DA; Drachkova IA; Arshinova TV; Ponomarenko PM; Savinkova LK; Kolchanov NA
BMC Genomics; 2015; 16 Suppl 13(Suppl 13):S5. PubMed ID: 26694100
[TBL] [Abstract][Full Text] [Related]
15. TC-motifs at the TATA-box expected position in plant genes: a novel class of motifs involved in the transcription regulation.
Bernard V; Brunaud V; Lecharny A
BMC Genomics; 2010 Mar; 11():166. PubMed ID: 20222994
[TBL] [Abstract][Full Text] [Related]
16. Genome-Wide Association Study for Major Biofuel Traits in Sorghum Using Minicore Collection.
Rayaprolu L; Selvanayagam S; Rao DM; Gupta R; Das RR; Rathore A; Gandham P; Kiranmayee KNSU; Deshpande SP; Are AK
Protein Pept Lett; 2021; 28(8):909-928. PubMed ID: 33588716
[TBL] [Abstract][Full Text] [Related]
17. Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri.
Fischer MC; Rellstab C; Leuzinger M; Roumet M; Gugerli F; Shimizu KK; Holderegger R; Widmer A
BMC Genomics; 2017 Jan; 18(1):69. PubMed ID: 28077077
[TBL] [Abstract][Full Text] [Related]
18. Sequence based polymorphic (SBP) marker technology for targeted genomic regions: its application in generating a molecular map of the Arabidopsis thaliana genome.
Sahu BB; Sumit R; Srivastava SK; Bhattacharyya MK
BMC Genomics; 2012 Jan; 13():20. PubMed ID: 22244314
[TBL] [Abstract][Full Text] [Related]
19. Identification of plant promoter constituents by analysis of local distribution of short sequences.
Yamamoto YY; Ichida H; Matsui M; Obokata J; Sakurai T; Satou M; Seki M; Shinozaki K; Abe T
BMC Genomics; 2007 Mar; 8():67. PubMed ID: 17346352
[TBL] [Abstract][Full Text] [Related]
20. Candidate SNP Markers of Chronopathologies Are Predicted by a Significant Change in the Affinity of TATA-Binding Protein for Human Gene Promoters.
Ponomarenko P; Rasskazov D; Suslov V; Sharypova E; Savinkova L; Podkolodnaya O; Podkolodny NL; Tverdokhleb NN; Chadaeva I; Ponomarenko M; Kolchanov N
Biomed Res Int; 2016; 2016():8642703. PubMed ID: 27635400
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
